Gene Hmuk_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1190 
Symbol 
ID8410710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1132009 
End bp1133016 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content60% 
IMG OID645019526 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003177023 
Protein GI257387250 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACT ACGCAGAACG GGTAGCTCGC TCCGTGTTAA CGGTGTGGGC CGCCGTAACA 
CTGACCTTCG GAATCCTTCG ACTGATGCCA GGGGGACCAC TGGTACAGCT CCGGGGGCAG
CTATCTCGAC GGAACATGTC ACCGGAAGAG ATAGAAAACC AGATGGCAGT GTACAAGGAA
CGACTCAACT ACGCGGACGC TCCGATCCAC GAGCAGTACA TCACCTACGT TTCGAGCCTG
CTCCAGGGAG ACTTCGGGGA GTCGCTCAAG GAGGGCGAGC CGGTCCTCCA GCTCATCGGC
GAGGCGCTCC CGTGGACGGT GTTCGTCATG ACGGTGGCGA CGATCCTGAT CTTCGCGATC
GCGATCGTCT GGGGGGCGCT GACAGCGTAC AGGGAGGGAT CGACGTTCGA CAAGGTCTCC
TCGGTGGCCG GTGTGCTCCT GGGATCGATC CCGTTCTACG TGTTCGCGTT CATCCTGTTG
CTGTTCCTGG CCTACGAGAA CAAGTTCTTC CCGGCCAGCG GGCGGATGAC GCCGTTGACC
GATGTGGAAC TGACGGTCGA TTTCATCGTC GACGTACTAC ACCACGCGGC GCTGCCGATC
GCGTCGGTCG TCGTCGTCCA GGCCGGGCTC CAGATGCTGT CGATGCGTGG GAACAGCATC
CAGGTGCTGG GGGAGGACTA CGTCCGTGTG GCCAGACTTC GTGGGCTCTC TGACCGCCGG
ATCTCGACGC GGTACGTGGC GAGAAACGCG ATCTTGCCGA TGTACACCGG CTTCCTGACG
CTGATCGGCT TCAACATCGG AAACTCCGTA ATTCTCGAAC AGGTGTTCAC CTATCGAGGG
ATCGGGTACG TCATGTTCGA CGCGCTCGAA GTCCAGGACT ACTCGATACT GATGGGCGTG
TTCCTGGTGT TTACCATCAT TCTCGTCGTC GCAGTGCTGA TCGCAGACCT GACCTACTCA
TGGGTCGATC CGCGGGTCAA ATCGGGTGAT GCAAGTGAAG CATACTGA
 
Protein sequence
MRYYAERVAR SVLTVWAAVT LTFGILRLMP GGPLVQLRGQ LSRRNMSPEE IENQMAVYKE 
RLNYADAPIH EQYITYVSSL LQGDFGESLK EGEPVLQLIG EALPWTVFVM TVATILIFAI
AIVWGALTAY REGSTFDKVS SVAGVLLGSI PFYVFAFILL LFLAYENKFF PASGRMTPLT
DVELTVDFIV DVLHHAALPI ASVVVVQAGL QMLSMRGNSI QVLGEDYVRV ARLRGLSDRR
ISTRYVARNA ILPMYTGFLT LIGFNIGNSV ILEQVFTYRG IGYVMFDALE VQDYSILMGV
FLVFTIILVV AVLIADLTYS WVDPRVKSGD ASEAY