Gene Hmuk_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1185 
Symbol 
ID8410705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1123769 
End bp1124818 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID645019521 
ProductDNA repair and recombination protein RadA 
Protein accessionYP_003177018 
Protein GI257387245 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02236] DNA repair and recombination protein RadA 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAT CAGAGGACCT CGAAGAGCTG CCGGGCGTCG GTCCGGCCAC AGCGGAGAAG 
CTCAAGGACA ACGGCTTCGA CGGCTATCAG GGAATCGCCG TCGCCTCCCC CGGCGAGTTG
TCGAACACGG CCGACATCGG CGAGTCGTCG GCGGCCGACA TCATCCAGGC CGCCCGAGAG
GCCGCCGACA TCGGCGGGTT CGAGACCGGC GCGACCGTTC TGGAGCGTCG CGAACAGATC
GGGAAGCTCA CCTGGTCGGT CTCGGAGGTC GACGACCTGC TGGGCGGTGG CATCGAGACC
CAGTCGATCA CCGAGGTGTA CGGCGAGTTC GGGGCCGGCA AGTCCCAGGT CACCCACCAG
ATCTCGGTGA CCGTCCAGCT ACCGGCCGAA CACGGCGGTC TGGAGGGGAG CGCGATCTTC
GTCGACTCCG AGGACACGTT CCGCCCCGAG CGGATCGATC AGATGGTCCG CGGCCTCGAC
GACGACGTTC TCGAAGACAC GATGGTGCTT CACGGCATCG TCGAGGAAGC GGGCGACGCC
GACGCGGGCG ACGAGGAACT GCTGGAAGCG CTCGTCGAGT CCGTCCTCGA CAAGATCCAC
GTCGCGAAGG CGTTCAACTC CAACCACCAG ATCCTGCTGG CAGAGAAGGC CCAGGAGATC
GCCAGCGAGA GTCAGGACGA CGACTTTCCG GTCCGCCTGC TCTGTGTCGA CTCGCTGACC
GCCCACTTCC GCGCCGAGTA CGTCGGTCGT GGCGAACTGG CCGACCGCCA GCAGAAGCTC
AACAAGCACC TCCACGACCT GATGCGCGTC GGCGACCTCA ACAACACCGC CGTCGTCGTC
ACCAATCAGG TCGCAGCCAA CCCCGACTCC TTCTTCGGCG ACCCGACCCA GCCCATCGGC
GGGAACATTC TGGGCCACAC GTCGACGTTC CGCATCTACC TCCGGAAGTC TAAAGGGAAC
AAGCGAATCG TCAAGCTCGT CGACGCGCCG AACCTCCCGG ACGGCGAAGC GGTCATGCGC
GTCGAAGAGG GCGGCCTGAT GGACGAGTGA
 
Protein sequence
MSTSEDLEEL PGVGPATAEK LKDNGFDGYQ GIAVASPGEL SNTADIGESS AADIIQAARE 
AADIGGFETG ATVLERREQI GKLTWSVSEV DDLLGGGIET QSITEVYGEF GAGKSQVTHQ
ISVTVQLPAE HGGLEGSAIF VDSEDTFRPE RIDQMVRGLD DDVLEDTMVL HGIVEEAGDA
DAGDEELLEA LVESVLDKIH VAKAFNSNHQ ILLAEKAQEI ASESQDDDFP VRLLCVDSLT
AHFRAEYVGR GELADRQQKL NKHLHDLMRV GDLNNTAVVV TNQVAANPDS FFGDPTQPIG
GNILGHTSTF RIYLRKSKGN KRIVKLVDAP NLPDGEAVMR VEEGGLMDE