Gene Hmuk_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1160 
Symbol 
ID8410680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1105520 
End bp1106227 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID645019496 
Producthypothetical protein 
Protein accessionYP_003176993 
Protein GI257387220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.452859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACT GTGAGTACTG TGACGGGTCC TTCGACAGCG AGGACGCGTA CCTCGATCAC 
CTCGGCAGCG CCCACGAGGG TGAGCTGGGG TCGATCGATC AGCGGCGGGT CGCCGAACAC
GACGGGAGCG ACGAGAGCCC GAGCCTCTCG CTGGGGCCGG CTATCCTGAT CGGTGTCGTC
GGCTTCTCGA TCGCGGTCGT GGTCTACGTC GTCGTCTTCA TGGGCGCGGG CGGTGGTGGA
TCGAGTCTCC CAGACAGCGG CGATCAGGCG GTCGTCTCGC AGGTGACGAC TCAGGAGTCC
GAGGGGCGGA CCCACGTCGA CCGGGGCACG GAGCTCACCT ACGAGCACAT GCCGCCGACC
TCCGGGCCAC ACTACGCCGA CTGGGCGACG GGGGGGTACT ACGACGACGA GACGGCCCCG
CCGCTGGGTG AGGTCGTCCA CGCGCTGGAA CACGGGGCGA TCGTCGTCTA CTACGACCCC
GACGGTATCG ATCCGGACGT TCGCGAGAGC TTCCGGCAGT ACGGCAATCG CTACACGGAC
GACTTCATGA GCTTCCTCGC GGTCCCGACG CCGGTCGAGG ACCCGGAGGC GACCTACGTC
CTGACGGCCT GGACCAAGCG CCTCGACATG GACGAGTACG ACGAAGAGAC CATGCGGCAG
TTCATGGCAG AGTACATCGG TCGCGGGCCC GAGCAGCGGG TCCGCTGA
 
Protein sequence
MVDCEYCDGS FDSEDAYLDH LGSAHEGELG SIDQRRVAEH DGSDESPSLS LGPAILIGVV 
GFSIAVVVYV VVFMGAGGGG SSLPDSGDQA VVSQVTTQES EGRTHVDRGT ELTYEHMPPT
SGPHYADWAT GGYYDDETAP PLGEVVHALE HGAIVVYYDP DGIDPDVRES FRQYGNRYTD
DFMSFLAVPT PVEDPEATYV LTAWTKRLDM DEYDEETMRQ FMAEYIGRGP EQRVR