Gene Hmuk_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1117 
Symbol 
ID8410636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1067155 
End bp1067634 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID645019453 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003176951 
Protein GI257387178 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.136519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.299442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA CCAGCATCGA CGACGTGGAC GCGCGGATCG GTCCCGCGGC CGTCAAGCGA 
GCGCTCGGCC CGGCGCTGGA GACGACCGAG GTCGCTCTCA ACTACTACGA ACTCGCGCCC
GGCGACAGCT TCGGCTTCGG CTATCACCGC CACAGCGATC AGGAAGAGGT CTTCTACGTC
TTTCAGGGGA CCGCCACCTT CGAGACCGAG GACGGGCCGG TAGCGGTCGG TCCCGACGAG
GTGATCCGGT TCGCGCCGGG CGAGTGGCAG CTCGGTCGCA ACGCGGGCGA CGAGCGAGTC
GTCGCACTGG CCGTCGGTGC TCCCGAAGCC AGCGGCGACA CGGAGATGGT ACGTGCGTGT
CCCGACTGTG AGGAGCGAAC CGAACAGACC GTCGACTGGG CCGACGACGG CGACGCTCTC
GTGACGCTGT GTGTCGACTG CGGTGCCAGA ACCGGGCGAT TCGAATATAG TAGCCATTGA
 
Protein sequence
MERTSIDDVD ARIGPAAVKR ALGPALETTE VALNYYELAP GDSFGFGYHR HSDQEEVFYV 
FQGTATFETE DGPVAVGPDE VIRFAPGEWQ LGRNAGDERV VALAVGAPEA SGDTEMVRAC
PDCEERTEQT VDWADDGDAL VTLCVDCGAR TGRFEYSSH