Gene Hmuk_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1111 
Symbol 
ID8410630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1063709 
End bp1064377 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID645019447 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_003176945 
Protein GI257387172 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000299933 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0487725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGGA GCAGTGAGCA GGCAGCGACG GGTGCCGACG ACGCCATCGC GGCCTTTGGC 
CGCGGCCAGC CGATCCTGAT CCACGACGCG GCCGATCGCG AGGGCGAGGT CGATCTGGTG
TATCCGGCCG GCGCAGTGAC GCCCGACGCC GTCGCCCGAC TGCGCAACGA CGCCGGCGGA
CTGGTCTGTG TCGCGCTCTC GGATTCGGTG GCCCATTCGT TCGACCTGCC GTTCATGCAG
GAGTCGCTCG ATCACCCCAG TGCCGCCGAT CACGAACTGG GGTACGACGA ACGCTCGTCG
TTCTCGCTGA CGGTCAACCA CCGCGACACC CACACCGGCA TCACCGACGA GGACCGGTCG
CTGACGATCA CCGAACTCGC AGGGGCCGCG AGCGAGCCCG ACGGAACGAC CTTCGCCGAA
CAGTTCCGGT CGCCGGGCCA CGTGACGCTG CTGCGCGGTG CGCCCGGACT GCTCTCGGAC
CGGCTGGGAC ACACCGAACT CGGGCTGGCC GTCGCCGCGG CGGCCGACCA GCCCCCGGCA
GTCGTGGTCT GTGAGATGCT CGACGACGAG ACCGGCGGCG CACTGACGCC GGCGGCGGCG
CGAGCCTACG CCGAGCGCGA GGGGCTGGCC TACGTCGAGG GGAGCGCTCT CGTCGAACGG
CTGATGTGA
 
Protein sequence
MSRSSEQAAT GADDAIAAFG RGQPILIHDA ADREGEVDLV YPAGAVTPDA VARLRNDAGG 
LVCVALSDSV AHSFDLPFMQ ESLDHPSAAD HELGYDERSS FSLTVNHRDT HTGITDEDRS
LTITELAGAA SEPDGTTFAE QFRSPGHVTL LRGAPGLLSD RLGHTELGLA VAAAADQPPA
VVVCEMLDDE TGGALTPAAA RAYAEREGLA YVEGSALVER LM