| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1104 |
|---|
| Symbol | |
|---|
| ID | 8410623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1056044 |
|---|
| End bp | 1056871 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645019440 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_003176938 |
|---|
| Protein GI | 257387165 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.217718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.455501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACACGGGCGA GGGCGAAGCG ACCGGGACGG TCCACCTCGT CGGCTCCGGC
CCCGGCGATC CGGAACTGCT GACGGTGAAG GCCAAGCGAC TGCTCGAAAC GGCCGACGTG
GTGTTACACG ACAAGCTCCC CGGTCCGGAG ATCATCGGCA TGATCCCCGA GGCGAAACGC
GAGGACGTGG GCAAGCGCGC GGGCGGCGAG TGGACGCCCC AGGAGTACAC GAACCGTCGC
CTCGTGGAGC TGGCCCGCGA GGGCAAGGAC GTGGTGCGGC TCAAGGGCGG GGATCCCACG
GTGTTTGGCC GCGGCGGCGA GGAGCTCGTC CACCTCGCAC GGCACGGCGT TCCGGTCGAG
ATCGTCCCCG GAATCACGTC GGCCGTCGCC GGTCCGGCGG CCGCCGGCAT CCCGGTCACC
CACCGCGACC ACGCGTCGTC GGTGTCGTTC GTCACCGGCC ACGAAGACCC CACGAAAGCG
GAGTCGGCCG TCGACTGGGC GGCACTCGCC GCGACCGGCG GCACCATCGT CGTGCTGATG
GGCGTCGGCA AGCTGCCCGA CTACACGGCC GCGCTCCGCG AGGCCGGCAT GGACCCCGAG
ACACCGGTCG CGCTGATCGA GCGCGCGACG TGGCCGGGCC AGCAGGTCGC GACGGGGACC
CTCGACAGTA TCGTCTCCGC CCGCGACGCG GCCGGCATCG AGCCGCCAGC GATCACCGTC
ATCGGCGACG TAGCGGCGAC GCGCGCGGAC GTCCTGGAGT TCCTCGTCGG AGCCGATCGG
GAGCCGGAGA ACGAGGCGGT CGACGACGGC GGTGACGGCG ATGCGTGA
|
|---|
| Protein sequence | MSDDTGEGEA TGTVHLVGSG PGDPELLTVK AKRLLETADV VLHDKLPGPE IIGMIPEAKR
EDVGKRAGGE WTPQEYTNRR LVELAREGKD VVRLKGGDPT VFGRGGEELV HLARHGVPVE
IVPGITSAVA GPAAAGIPVT HRDHASSVSF VTGHEDPTKA ESAVDWAALA ATGGTIVVLM
GVGKLPDYTA ALREAGMDPE TPVALIERAT WPGQQVATGT LDSIVSARDA AGIEPPAITV
IGDVAATRAD VLEFLVGADR EPENEAVDDG GDGDA
|
|---|
| |