Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1083 |
Symbol | |
ID | 8410602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1030056 |
End bp | 1030889 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645019419 |
Product | ABC-2 type transporter |
Protein accession | YP_003176917 |
Protein GI | 257387144 |
COG category | [R] General function prediction only |
COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.147052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGGC AGGCCGTCGC GCGCAAGGAC TTTCGGGACG CCTCGCGATC CTACCTCCTC TGGGGGCTGA CGATCGGGTT CATCGCGCTG GTCTCGCTGG CGGCGGCGGT GCTCGGGTGG GTCCAGTCGA ACCCCACCTC CACGGACATC CTCGGAGTGC TCCACATGCT GTTCCAGTAC GTCGTCCCGC TGATCGCGAT CGCGATCTCG TTCGGGGCGA TCGTCAACGA ACGAGACTCC GGGTCGCTGA AGATCCTGCT ATCGCTCCCC CACTCCCGGA CGGACGTGAT CCTGGGGAAG GTGCTGGGCC GGACGGCCGC GTTCGTCGTC CCGCTCGTGC TGGGCATGGT CGTGCCCGCC GTGGCACTCC TGGTCGTCGG CGTCGAGTTC GAGGCCGCGA AGTACTTCGG CTACCTCCTG TTTGCGACGC TGTTCGGCGT CGCGTTCGTC TCCGTCGCGA CGGGGATGTC GGCGACCTTC GAGTCCCGCT TCCGCGTGCT GCTGGCCGTC TTCGGCTTCT ACTTCGTGTT CAACATCCTC TGGCGGGCGA TCAACACCGC GTCGTTCGTC ATCGTCCTCA CGCTCAGCGG CCAGTGGCCC AGCTGGATGC CACTGACCGT CCAGGAGACG CTGCGCGTGT TCCAGTTGCT CAGCCCGACG GGTGACTTCC AGATCCTCCG ACAGGCGCTG ATGAACGACG TGCTGTTCGC CTCCGAGGTC TCTCAGGGAC TGCCGGACTT CCGGCTCCAG CTGGGCGCGA TGGCGATGCT GCTCGTCTGG ATCACGCTGC CGATCCTGAT CGGTATTCTC CGGTTCGAAG AAGCGGACCT GTAG
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Protein sequence | MSWQAVARKD FRDASRSYLL WGLTIGFIAL VSLAAAVLGW VQSNPTSTDI LGVLHMLFQY VVPLIAIAIS FGAIVNERDS GSLKILLSLP HSRTDVILGK VLGRTAAFVV PLVLGMVVPA VALLVVGVEF EAAKYFGYLL FATLFGVAFV SVATGMSATF ESRFRVLLAV FGFYFVFNIL WRAINTASFV IVLTLSGQWP SWMPLTVQET LRVFQLLSPT GDFQILRQAL MNDVLFASEV SQGLPDFRLQ LGAMAMLLVW ITLPILIGIL RFEEADL
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