Gene Hmuk_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1083 
Symbol 
ID8410602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1030056 
End bp1030889 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID645019419 
ProductABC-2 type transporter 
Protein accessionYP_003176917 
Protein GI257387144 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.147052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC AGGCCGTCGC GCGCAAGGAC TTTCGGGACG CCTCGCGATC CTACCTCCTC 
TGGGGGCTGA CGATCGGGTT CATCGCGCTG GTCTCGCTGG CGGCGGCGGT GCTCGGGTGG
GTCCAGTCGA ACCCCACCTC CACGGACATC CTCGGAGTGC TCCACATGCT GTTCCAGTAC
GTCGTCCCGC TGATCGCGAT CGCGATCTCG TTCGGGGCGA TCGTCAACGA ACGAGACTCC
GGGTCGCTGA AGATCCTGCT ATCGCTCCCC CACTCCCGGA CGGACGTGAT CCTGGGGAAG
GTGCTGGGCC GGACGGCCGC GTTCGTCGTC CCGCTCGTGC TGGGCATGGT CGTGCCCGCC
GTGGCACTCC TGGTCGTCGG CGTCGAGTTC GAGGCCGCGA AGTACTTCGG CTACCTCCTG
TTTGCGACGC TGTTCGGCGT CGCGTTCGTC TCCGTCGCGA CGGGGATGTC GGCGACCTTC
GAGTCCCGCT TCCGCGTGCT GCTGGCCGTC TTCGGCTTCT ACTTCGTGTT CAACATCCTC
TGGCGGGCGA TCAACACCGC GTCGTTCGTC ATCGTCCTCA CGCTCAGCGG CCAGTGGCCC
AGCTGGATGC CACTGACCGT CCAGGAGACG CTGCGCGTGT TCCAGTTGCT CAGCCCGACG
GGTGACTTCC AGATCCTCCG ACAGGCGCTG ATGAACGACG TGCTGTTCGC CTCCGAGGTC
TCTCAGGGAC TGCCGGACTT CCGGCTCCAG CTGGGCGCGA TGGCGATGCT GCTCGTCTGG
ATCACGCTGC CGATCCTGAT CGGTATTCTC CGGTTCGAAG AAGCGGACCT GTAG
 
Protein sequence
MSWQAVARKD FRDASRSYLL WGLTIGFIAL VSLAAAVLGW VQSNPTSTDI LGVLHMLFQY 
VVPLIAIAIS FGAIVNERDS GSLKILLSLP HSRTDVILGK VLGRTAAFVV PLVLGMVVPA
VALLVVGVEF EAAKYFGYLL FATLFGVAFV SVATGMSATF ESRFRVLLAV FGFYFVFNIL
WRAINTASFV IVLTLSGQWP SWMPLTVQET LRVFQLLSPT GDFQILRQAL MNDVLFASEV
SQGLPDFRLQ LGAMAMLLVW ITLPILIGIL RFEEADL