Gene Hmuk_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1080 
Symbol 
ID8410599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1027312 
End bp1027893 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID645019416 
Productheat shock protein Hsp20 
Protein accessionYP_003176914 
Protein GI257387141 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0093139 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGGC AACCCTATCA GGCGGTTCCT CAGTGGCGGT CCGTCCAGTC ACCACAGCGC 
GTCGCCCAGG GAACTGTGCC CGACGTGACC GACGCCCGGC AACTCTCACA GGCCGCGACC
GGCGCGGCCC AGCAGGGCTG GAGCGCGACG CAGACAGGCG TCCAGCAGCC CGCACAGGCG
AGCCAGCAAT CCGCCGGTAT GCAGTCCATT CAGGGACAGC AACCGACACG GGCGGCGGTA
ACGTCGACAC AGATCTCGAC ACAGCAGCCG CCGGTCGACG TGCTAGAGAC GCCAGACGAG
CTGCTCGTGC TGGTCGACAT GGCGGGGTTC GACGAGGACG ACATCCAGCT CGACGTCGAC
GACGACGTGC TGCGGATCGC CGCCAGCCGC ACCCTCTCGA TCGACGACGA CGAGACGCTG
CTCACCCAGG AGCGCCCGAC CCGCTTCGAG CGCTACCTCC AGTTGCCGGT CGAGGCGAAC
ATCGAGGCGG CGAAGGCGAA ACACGAAGCC GGCGTCTGTC GGATCACGCT GCCCAAATCC
GAGCAGGCAC GCGATAACCA CCACCGCATC GGCTTCCAGT AG
 
Protein sequence
MSRQPYQAVP QWRSVQSPQR VAQGTVPDVT DARQLSQAAT GAAQQGWSAT QTGVQQPAQA 
SQQSAGMQSI QGQQPTRAAV TSTQISTQQP PVDVLETPDE LLVLVDMAGF DEDDIQLDVD
DDVLRIAASR TLSIDDDETL LTQERPTRFE RYLQLPVEAN IEAAKAKHEA GVCRITLPKS
EQARDNHHRI GFQ