Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1059 |
Symbol | |
ID | 8410578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1009041 |
End bp | 1010519 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645019395 |
Product | phosphoesterase RecJ domain protein |
Protein accession | YP_003176893 |
Protein GI | 257387120 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.228608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.214918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACCAG TCCCCGACCT CGACGACGTT GCGACCGCGT GTGCCCAGCG GCTCTGTCGC GCGGATCGCG TACTGTTGGC GTCACACATC GACGCCGACG GCCTGACCAG TGCCGCCGTC GCCTCGCTGG CACTGGAGCG GGCCGGAATC CCCTTCGAGG TCGTGTTCAA GAAGCAACTC GACGAGACAG AGATCGCCTC GATCGCCGCC CGCGAATACG ACACCGTCCT CTTTACCGAC TTCGGCAGCG GGCAACTCGA CGTGATCAGC GAGCACGAGC GAGCGGGCGA CTTCGAGCCC GTGATCGCCG ACCACCACCA GCCGGCCGTC GTCGACGGGC AGCGCCCGTC TGCCAGTGGG ACGGACTCTC ACCCTGCCGA GACGGAGTTT CACCTGAACC CGCTGCTCGT CGGCCTCGAC GGGGCCTCGG AGCTGTCGGG TGCGGGCGCG AGCTACGTCC TCGCGCGGGC GCTGGCCGAG GTCGGCGAGA CCGAGCCACC CGACGGGAAC CGGGACCTGG CCGGTCTGGC CGTCGTCGGC GCTGTCGGTG ACATGCAGGC CGTCGACGGC GAACTCGTCG GCGCGAACAC CGGCATCGTC GAGGAGGGCG TCGCGGCCGG CGTCCTCGAA GAGGGGACCG ACCTGACGCT GTACGGCAAG CAGACCCGGC CGCTGCCGAA GCTACTGGAG TACGCCACGG AGGTCCCGAT CCCCGGCATC TCCAACGACG AGGCCGGCGC GATCCGGTTT CTCGAATCGC TCGGGCTCGA CCTGAAGCGG TCCGGCGAGT GGCGCACGTG GGCGGACCTG ACCGACGACG AACGCCAGAC CGTCGCCAGC GCGCTGGTCC AGCGGGCCGT CGAGCGCGGC GTGCCCGCCG ACGACATCCA GACGCTGATC GGCACGACGT ACACGCTGAC CGAGGAGCCG ACGGGGACGG AGCTGCGCGA CGCCAGCGAG TTCTCGACGC TGTTGAACGC GACCGCCCGC TACGAGCGTG CCGACGTGGG CCTTGCGGTG TGTCGCGGCG ACCGCGAGGC CGCGCTCGAC CGCGCCCAGA CGCTGCTCTC GAACCACCGT CGGAACCTCT CGGAGGGACT GACGCTGATC CAGGAGCGGG GCGTGACCCA CGAGGACAAC GTCCAGTGGT TCGACGCCGG CTCGGCGATC CGCGAGACGA TCGTCGGCAT CGTCGCCGGC ATGGCGCTGG GGACGGCCGG CGTGGACGCC GACAAGCCGA TCCTCGCGTT CGCCAGCAAG GACGACGACG AGACGAAAGT CTCCTCGCGC GGGACCGGCC CGCTCGTGGG ACGGGGCCTG GACCTCTCGG CGGTGATGCG CGAGGCGGCC CGTTCGGTCG GCGGCGACGG CGGCGGCCAC GACATCGCGG CCGGCGCGAC CGTTCCGGCG GGCGAAGAGC AGGCCTTCGT CGACGCCGCC GACGAGATCG TGGCCGACCA GCTCGGCAAC AAGAGCTAA
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Protein sequence | MGPVPDLDDV ATACAQRLCR ADRVLLASHI DADGLTSAAV ASLALERAGI PFEVVFKKQL DETEIASIAA REYDTVLFTD FGSGQLDVIS EHERAGDFEP VIADHHQPAV VDGQRPSASG TDSHPAETEF HLNPLLVGLD GASELSGAGA SYVLARALAE VGETEPPDGN RDLAGLAVVG AVGDMQAVDG ELVGANTGIV EEGVAAGVLE EGTDLTLYGK QTRPLPKLLE YATEVPIPGI SNDEAGAIRF LESLGLDLKR SGEWRTWADL TDDERQTVAS ALVQRAVERG VPADDIQTLI GTTYTLTEEP TGTELRDASE FSTLLNATAR YERADVGLAV CRGDREAALD RAQTLLSNHR RNLSEGLTLI QERGVTHEDN VQWFDAGSAI RETIVGIVAG MALGTAGVDA DKPILAFASK DDDETKVSSR GTGPLVGRGL DLSAVMREAA RSVGGDGGGH DIAAGATVPA GEEQAFVDAA DEIVADQLGN KS
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