Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1036 |
Symbol | |
ID | 8410554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 987970 |
End bp | 989853 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645019371 |
Product | TrkA-C domain protein |
Protein accession | YP_003176870 |
Protein GI | 257387097 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.131112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCG TCTTCGCCGT CGTCGCCGGT GCGCTCGTCC TCTTCGCGAC CGAGCGCGTG CCCGTCGACG TGACCGCCAT CGGCGTGATG GTTGCACTGC TGGTCGTCGA ACCGCTGACC GCGCTGCTGG CCGACGCCGG AGTGCTGGCC GGGCGACTCT ACGTCCTCCA CGAGCCCGGC GACGCCGTCG ATCCGGTGGC CGTGGGGCTC TCGGGCTTTG CCTCTCCGGC GACGATCACC GTCCTCGCGA TGTTCGTCCT CTCGGCGGGG GTCCAGCGGA CCGGGGTAAT CCAGATTCTG GGGGCCAAGG TCGCCGCTCT GACCGGTGAC AGCGAGTCCA GACAGCTCGG GGCGACCGTC GGCATCGTCG GGCCGATCTC CGGGTTCATC AACAACACGG CGGCCGTCGC CATCCTGCTG CCCATGGTGA CAGACCTCGC ACACAAGGGC CAGACCTCTC CCTCGAAGCT GTTGATGCCG CTCTCTTTTG CCTCGATGTT CGGAGGGATG CTCACGCTGA TCGGCACCTC GACGAACATC CTCGCCAGCG ACCTCGCCGG CCGACTGGCG ATCGAGGACC CGGCGCGGTA CGGCGACCTC CACGCGTTCT CCATGTTCGA GTTCACACAG CTCGGCGTGA TTCTCCTGGT GGTCGGCTCT CTGTACCTCA TGACGGTCGG TCGCTGGCTC ACTCCCGAAC GCATCAAACC GCGTGGCGAC CTGACCCAGG AGTTCGAGAT GGCCGACTAC CTCACCGAAG TCGTCGTCCG CGAGGACTCG CCGATCGTCG GCCAGACCGT CCACGACGCG CTGGAAGCGA CCGACCTCGA CATCGACATC GTCCAGCTAA TCCGAGATCG CCGGACCTTC CTCGAACCGC TCGGTGCGAA GTCGATCCGG GCCGGTGACG TGTTCGCGAT CCGGACCGAC CGGGACACGC TCGTCGAACT GCTCGACGCC GAGGGCCTGG ACGTGGTTCC CGACGCGGTC GTCGGCGAGG CGGAACTCGA AGCGGCCGAG GAACGACAGA ACCTCGTCGA GGTCGTGATC GCACCGGGCT CGGAGCTGGT CGGCGCATCG CTCCGGTCGA CGAACTTCCG ACAGCGCTAC GACGCCAACG TCCTCGCGCT CCGACGCGGC GGCGAGTTGA TCCGCCAGCG GATGGACCGG ACGACGCTTC GCGTCGGCGA CACGCTCCTG ATTCAGGGGG CCGGCGACAG CATCGACCGC CTGAACAACA ACCCGAACTT CATCGTCGCC CGCGAGGTCG AACGCCCCGA CTTCCGGAAG TCGAAAGTCC CCGTCGCCGT CGGTATCGTC GCCGCCGTCG TCGCCGTCGC GGCACTCACG CCGGTCCCGA TCGTCGTCTC GGCGCTGGCC GGCGCGCTCG GGATGATCCT CTCTGGCTGT CTGCGCTCCT CGGAGATCTA CGACGCCGTC CAGTGGGACG TGATCTTCCT GCTCGCGGGC GTCATCCCGC TGGGGCTCGC CCTGGAGGCG ACCGGCGGAG CGACGCTGCT GGCCGACCTC CTCGTGCTCG CCGCGCCGTC GTTCCCGCCG CTCGTGGTGC TCGGGCTGAT GTACGTCGTC ACGGCGGTCC TGACGAACAT CATCTCGAAC AACGCCAGCG TCGTCCTCAT GATCCCCGTC GCCGCCGAGG CCGCCGTCCA GCTCGGAGCC AACGCCTTCG CGTTCGTGCT GGCCGTGACC TTCGCCGCCT CGACGGCCTT CATGACGCCC GTTGGCTACC AGACGAACCT CTTCGTCTAC GGCCCCGGTG GCTATCGATT CACCGACTAT CTGCGGGTCG GCGCGCCGCT ACAGGCGGTC TTTGCCGTCG TCACGACTCT GGGCATCGCC TACTTCTGGG GCCTGACTCC GTGA
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Protein sequence | MAFVFAVVAG ALVLFATERV PVDVTAIGVM VALLVVEPLT ALLADAGVLA GRLYVLHEPG DAVDPVAVGL SGFASPATIT VLAMFVLSAG VQRTGVIQIL GAKVAALTGD SESRQLGATV GIVGPISGFI NNTAAVAILL PMVTDLAHKG QTSPSKLLMP LSFASMFGGM LTLIGTSTNI LASDLAGRLA IEDPARYGDL HAFSMFEFTQ LGVILLVVGS LYLMTVGRWL TPERIKPRGD LTQEFEMADY LTEVVVREDS PIVGQTVHDA LEATDLDIDI VQLIRDRRTF LEPLGAKSIR AGDVFAIRTD RDTLVELLDA EGLDVVPDAV VGEAELEAAE ERQNLVEVVI APGSELVGAS LRSTNFRQRY DANVLALRRG GELIRQRMDR TTLRVGDTLL IQGAGDSIDR LNNNPNFIVA REVERPDFRK SKVPVAVGIV AAVVAVAALT PVPIVVSALA GALGMILSGC LRSSEIYDAV QWDVIFLLAG VIPLGLALEA TGGATLLADL LVLAAPSFPP LVVLGLMYVV TAVLTNIISN NASVVLMIPV AAEAAVQLGA NAFAFVLAVT FAASTAFMTP VGYQTNLFVY GPGGYRFTDY LRVGAPLQAV FAVVTTLGIA YFWGLTP
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