Gene Hmuk_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1027 
Symbol 
ID8410544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp980002 
End bp980934 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID645019361 
Productnucleic acid binding OB-fold tRNA/helicase-type 
Protein accessionYP_003176861 
Protein GI257387088 
COG category[L] Replication, recombination and repair 
COG ID[COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0873522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT TGCATACCCC TGCGACAGAG ATACAAGAGC AGTTCGACGA CCAGCTCGAC 
GTGACCGTCG ACGAGATCGA GGAGCGCCTC GAAACGCTGG TCGAGGAGTA CAAGGTCCCG
CTCAGCGAGG CCCGCCGCAG CGTCGTCAAC ACGTACCTCG ACGACGCCGG CATGGACCGC
GACCAGCTCT CGGGCGGTGG CGGCAACGAG CACGTCGACA TCGCCGACGT GGACGCACCC
GAGGAGTGGA TCGACGTGAC CGCGAAGGTC GTCGAGCTGT GGGACGCCAC GGCCGACGCC
GTCGCGCAGG TCGGCCTGCT GGGCGACGAG ACCGGGACCA TCAAGTTCAC CAAGTGGTCC
AAGTCCGACC TCCCGGAACT CGAAGAAGGG CAGGTCTACG AGCTTCGAAA CGTCGTCACC
GACGAGTACC AGGGTCGCTT CTCCGTGAAG CTCAACCGGA CGACGACCAT CGAGGCCGTC
GACGAGGAGA TCGAGGTCGG CGACGACGCC GTCGAGGTCG AGGGCGCGCT GGTCGACATC
CAGTCGGGTA GCGGGCTCAT CAAGCGATGT CCCGAGGAGG ACTGTACGCG GGTCCTCCAG
AACGGCCGCT GCAACGAGCA CGGCGAGGTC GAAGGCGAGT TCGACCTCCG CATCAAGGGC
GTCCTCGACG ACGGCGAGGA AGTCACCGAA GTCATCTTCG ACGAGGAAGC CACGGAGAAA
CTGACTGGCA TCTCGCTCGA AGAGGGCAAG GAGATGGCCA TGGACGCACT GGACACGACC
GTCGTGGCCG ACGAGATGCG CCAGAAGGTG CTGGGACGGT ACTACCGAGT CACCGGCCCG
ACGCTCGGCC GATACGTCCT GGCGAACGAA CAGGAGCGAC TGGACGGGCC AGTGGACGCA
GAGGCGATGC TGATCAAAGC GAGGTCGATC TGA
 
Protein sequence
MTDLHTPATE IQEQFDDQLD VTVDEIEERL ETLVEEYKVP LSEARRSVVN TYLDDAGMDR 
DQLSGGGGNE HVDIADVDAP EEWIDVTAKV VELWDATADA VAQVGLLGDE TGTIKFTKWS
KSDLPELEEG QVYELRNVVT DEYQGRFSVK LNRTTTIEAV DEEIEVGDDA VEVEGALVDI
QSGSGLIKRC PEEDCTRVLQ NGRCNEHGEV EGEFDLRIKG VLDDGEEVTE VIFDEEATEK
LTGISLEEGK EMAMDALDTT VVADEMRQKV LGRYYRVTGP TLGRYVLANE QERLDGPVDA
EAMLIKARSI