| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0983 |
|---|
| Symbol | |
|---|
| ID | 8410500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 938107 |
|---|
| End bp | 938925 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645019319 |
|---|
| Product | Prephenate dehydratase |
|---|
| Protein accession | YP_003176819 |
|---|
| Protein GI | 257387046 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.432859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGC TCACGCTGGG GCCGGCCGGA ACCTACTCGC ACCGGGCAGC CCGCTCGGTC
GCCGACGACG ACGAGATCGA GTTCCGAGAG TCGCCGACCG CCATCGTCGA AGCGGTCGCG
GGCGGCGAGG CGGATCGCGG CGTCGTCGCC GTCGAGAACA GCATCGAGGG ATCGGTCACG
GAGAGCCTCG ACGCCTTCGC GGGCTACGAG GTCGCCGTCG TCAAGGAGAT CATCACGCCG
ATCCGTCACG CGCTGCTGGC CCAGCGCGGC GACTTCGAAC TGGTCGCCAG CCACGCCCAG
GCGCTGGCCC AGTGTCGGTC CTACCTCGAC GCCAACTACC CCGACGCCAA GCTGGAGGCC
GTCGCCTCCA CCGCTCGCGG CGTCGAGCGC GCCCGCGACG ACCCGTCGGT CGCCGGTATC
GGCCACCCGG ACAACGGCGG CGAGGGCACC GATCTGCAGG TGCTGGCCGA AGACATCCAG
GACCAGTCCT CGAACGCCAC GCGCTTCGTG GTCGTCGCGC CGCTCGCCGA GCGGTCCGAC
GCGGGCTCGA AGTCCTCGCT GATCGTCTAC CCCAACGTCG ACTACCCCGG ACTGCTGCTG
GAGATGCTGG AGCCGTTCGC CGACCGCAAC ATCAATCTCA CTCGGGTGGA GTCTCGCCCC
AGCGGCGAGC GGCTGGGCGA CTACGTCTTC CACGTCGACG TGGAGGCCGG CCTCTACGAG
GAACGGACCC AGAAGGCACT GGCAGACATC GAAGCCATCG CCGAGAAGGG ATGGGTGAAG
CGACTGGGCT CGTACGACTC CGAGACCGTC CTGAATTGA
|
|---|
| Protein sequence | MKMLTLGPAG TYSHRAARSV ADDDEIEFRE SPTAIVEAVA GGEADRGVVA VENSIEGSVT
ESLDAFAGYE VAVVKEIITP IRHALLAQRG DFELVASHAQ ALAQCRSYLD ANYPDAKLEA
VASTARGVER ARDDPSVAGI GHPDNGGEGT DLQVLAEDIQ DQSSNATRFV VVAPLAERSD
AGSKSSLIVY PNVDYPGLLL EMLEPFADRN INLTRVESRP SGERLGDYVF HVDVEAGLYE
ERTQKALADI EAIAEKGWVK RLGSYDSETV LN
|
|---|
| |