Gene Hmuk_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0946 
Symbol 
ID8410462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp908287 
End bp909387 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID645019281 
ProductABC transporter related 
Protein accessionYP_003176782 
Protein GI257387009 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.309285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG TACGTCTCTC TGATGTCACA AAGGTGTACG ACGATCTTCT GGCGGTCAAG 
GAGATAGATT TCACCGTCCG GGACGGGGAG TTCCTCGTGA TGGTCGGTCC GTCCGGCTGT
GGGAAGTCGA CGACGCTCCG GATGATCGCG GGGCTCGAAA CGATCACCTC GGGCGAGATC
GAAATCGGTG ACCAGATCGT CAACGACGTC CGACCACAGG ACCGCGATAT CGCGATGGTG
TTCCAGAACT ACGCGCTGTA TCCCCACATG AGCGTTCGGG AGAACATGTC CTTCGGACTG
CGTCTCTCCG ACGAGTACGA GGACGCCGAG ATCGACGAGC GGGTGAACGA CGCCGCCGAT
CTCCTCGAAA TTCCGGAGCT GCTCGATCAG CTCCCCAAGC AGCTCTCTGG CGGCCAGCAA
CAGCGTGTGG CGCTCGGACG CTCCATCGTC CGAGACCCCG ACGTGTTCCT GATGGACGAG
CCGCTCTCGA ATCTCGACGC CAAGCTGCGG ACCCAGATGC GCACCGAGCT CCAGCGTATC
CAGGAGGAAC TGGGTGTGAC GACGATCTAC GTCACCCACG ACCAGACCGA GGCCATGACG
ATGGGCGACC GCATCGCCAT CCTCAACGAC GGCGAACTCC AGCAGATCGC CGAGCCGGAG
GTGTGTTACG ACCGCCCGAA CAACAAGTTC GTCGCGGGGT TCATCGGCTC GCCGAGCATG
AACTTCTTCG AGGTCGACGT GACCGAAAGC GGCGACGGCG TCCACCTCTC GGGCAACGGG
TTCGAGACGA CTCTCGGGGT GTCTCTCGAC GCCGGTGCCT ACACGCTCGG CGTCCGCCCC
GAGGACCTGA CCGTCGGCAC CGACGAGGGC CACCTCGAAG CCGTCGTCGA CGTGGTCGAG
CCGATGGGCT CGGACAACTT CCTCTATCTG CATCCGCCCG AGGGCGACGG CGAGATCATC
GCCCGCGTCG ACAGCGAGTA CCATCCCGAG CCCGGTGAGA CGGTTTCGCT GGGCTTCGAT
ATCGAGGACA TCCACTTCTT CGACGAGACG GGCGACCGCG TCCCGATCGA CGACGAACCC
GAAGCGATCC CGACAGCCTG A
 
Protein sequence
MSKVRLSDVT KVYDDLLAVK EIDFTVRDGE FLVMVGPSGC GKSTTLRMIA GLETITSGEI 
EIGDQIVNDV RPQDRDIAMV FQNYALYPHM SVRENMSFGL RLSDEYEDAE IDERVNDAAD
LLEIPELLDQ LPKQLSGGQQ QRVALGRSIV RDPDVFLMDE PLSNLDAKLR TQMRTELQRI
QEELGVTTIY VTHDQTEAMT MGDRIAILND GELQQIAEPE VCYDRPNNKF VAGFIGSPSM
NFFEVDVTES GDGVHLSGNG FETTLGVSLD AGAYTLGVRP EDLTVGTDEG HLEAVVDVVE
PMGSDNFLYL HPPEGDGEII ARVDSEYHPE PGETVSLGFD IEDIHFFDET GDRVPIDDEP
EAIPTA