| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0939 |
|---|
| Symbol | |
|---|
| ID | 8410455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 901685 |
|---|
| End bp | 902062 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645019274 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_003176775 |
|---|
| Protein GI | 257387002 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.445862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.428403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGAAA TCCATACGGA CGACGCACCG AGCGCGATCG GACCGTTCTC ACAGGCGATG
CAGGACGGCG ACCGCATCTA CGTCTCCGGC CAGGGGCCGG TCGATCCCGA GAGCGGCGAG
ATCGTCTCCG AAGACATCAA AGAGCAGACC GCACAGACCC TCGAAAATCT GGAGACGATC
CTGGAGGCTG CCGACGCGTC GCTAGACGAC GTGCTGAAGA CGAACGTCTA CGTCACCAAC
ATGGACAACT ACGACGCGGT CAACGAAGTG TACGCCGAGT ACATGTCCGA GCCGTACCCG
GCCCGCGCGG CCATGGAAGT GTCCCGCCTC CCCATCGACA TCGGCGTCGA GATCGAACTC
GTCGCTCGCA GCGAGTAG
|
|---|
| Protein sequence | MREIHTDDAP SAIGPFSQAM QDGDRIYVSG QGPVDPESGE IVSEDIKEQT AQTLENLETI
LEAADASLDD VLKTNVYVTN MDNYDAVNEV YAEYMSEPYP ARAAMEVSRL PIDIGVEIEL
VARSE
|
|---|
| |