| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0936 |
|---|
| Symbol | |
|---|
| ID | 8410452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 898932 |
|---|
| End bp | 899963 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645019271 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003176772 |
|---|
| Protein GI | 257386999 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.674566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCCA AGGGCTGTGA ACAGTGTGCC GAGGGCGGGA AGATGGTCAT GTTCGTCTAC
GGCTACTGTG ACCAGCGCGA TTGCTTCTAC TGTCCGCTGG GCGAGAACCG CAAGAACGTC
GATCAGGTGT ACGCGAACGA GCGCCCCGTC GAGTCCGACG AGGACGTGAT CGCCGAGGCG
AAACTGATGG ACGCGCTGGG GACCTCCATC ACGGGCGGCG AGCCCCAGGA GGCGCTGGAC
CGAACGTGTC ACTACCTCGA ACTGCTGAAA GACGAATTCG GCGAGGACCA CCACACGCAC
CTCTACACCG GGATCACGGG CGGGCGCGAG AACATGCGCC GCCTCAGCGA GGCGGGCCTC
GACGAGATCC GTTTCCACCC GCCCCTCGAA CAGTGGGGCG ACCTCCACGG CACCGAGTGG
GAGGAGATCC TCTACATCGC CCGCGAGGAA GGTCTCACAC CGGCCTTCGA GATTCCCGGC
ATCCGCGCCG AAGAGGAGTT CCTCGACTTT CTCGACGAAG GGGCCGCCGA CTTCTGTAAC
ATCAACGAGT TCGAGATGTC CGACGGGAAC TTCCGCCGGA TGCAAGCGGA GGGCTTCGAG
CGCAAGGAAG GCCACATGAG CGCCGTCGAG GGGAGCCACG AGATCCTGGA GACGATGGGC
GACCACGAGA AGGTCTACTT CTGTACTTCC GTCTTCAAGG ACGCCGCCCA GCACCGCTCC
CGGATGAAGC GCATGGCCCG CAACATCGGC CGCGAGTTCG ACGAGGTCAC CGACGACGGC
ACGCTCGTCT ACGGCAAGAC CTGGGTCGGC GAGGACCGCC TGCAGGAACT GGGCGTGCCC
GAGGAGTTCT ACGCCGTGAA ATCGGAGCAC GTCGAACTCG CCTGGTGGCT CCTCGAAGAG
ATGGTCGAGG ACGGCGACGT CGAGAAGGGT GAGATCGTCG AGCAGCACCC GACGTACGAC
GGGACCGTCG TGGAACGGAC GCCGCTGTCC TCGGGGCAGC CGGGGGGCGG GCAGTCGGCG
GCTGGGGACT GA
|
|---|
| Protein sequence | MISKGCEQCA EGGKMVMFVY GYCDQRDCFY CPLGENRKNV DQVYANERPV ESDEDVIAEA
KLMDALGTSI TGGEPQEALD RTCHYLELLK DEFGEDHHTH LYTGITGGRE NMRRLSEAGL
DEIRFHPPLE QWGDLHGTEW EEILYIAREE GLTPAFEIPG IRAEEEFLDF LDEGAADFCN
INEFEMSDGN FRRMQAEGFE RKEGHMSAVE GSHEILETMG DHEKVYFCTS VFKDAAQHRS
RMKRMARNIG REFDEVTDDG TLVYGKTWVG EDRLQELGVP EEFYAVKSEH VELAWWLLEE
MVEDGDVEKG EIVEQHPTYD GTVVERTPLS SGQPGGGQSA AGD
|
|---|
| |