Gene Hmuk_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0929 
Symbol 
ID8410445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp889673 
End bp890689 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content71% 
IMG OID645019264 
Productamidohydrolase 
Protein accessionYP_003176765 
Protein GI257386992 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.10942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGT TAGAGGGAAC CGTTCTCGTC GGTGAGTCGT TCGAACCCGT TACGGGCCGT 
GTCGTCGTCG AAGACGGCCG GATCGAGGCG GTCGAGGAGA CCGACACGGC GTCGACGGAC
ATCATCCTGC CGGCGTTCGT CAACGCACAC ACCCACCTCG GTGACGCGGT CGCGAAAGAC
GCCGCCGTCG GGCTCTCGCT CGACGCGGCG GTCGCACCGC CCGACAGCCT GAAGCACCGT
CGACTGGCCG ACGCCGACCG GGCCGAGCTC GTGACCGCGA TGCGCCGGAC GCTTCGGTTC
ATGCAGCGGA CCGGGACCGT CTCGACGCTG GACTTCCGGG AGTTCGGGAG AGAGGGCGCG
CGGACGCTCC GGGAGGCCGC CGAGCCGCTG TCGATCGATC CGTTCGTCTT CGGGAGCGGA
GACGCGTCGG TCCTCGACGT GGCCGACGGC TTCGGAGCCA GCGGTGCCAA CGACGACGAC
TTCGGGCCAC AGCGCGACGC GGCGGCCGAC CGGGGCGTCC CCTTCGCCAT CCACGCCGGA
GAACCGGACC AGACGGACAT CCACCCCGCG CTCGATCTGG AGCCGGACCT GCTCGTCCAC
ATGGTTCACG CCGCAGGGGA GCACCTCGAA CGCGTCGCCG AGCAGTCCGT CCCGGTGGCG
GTGTGCCCGC GCGCCAACAC CGTCCTCGGC GTCGGCCGGC CGCCGATTCG AGACCTGCTC
GATCACACGA CCGTCGCGCT CGGCACGGAC AACGTCATGT TGAACCCGCC GTCGATGTTC
CGAGAGATGG CGTACACGGT CAGGCAGTTC GACGTGAGCG CCCGCGAGGT ACTGCGGATG
GCGACGACGG CCGGTGCCGA GATCGCGGGC CTCGACTGTG GCGTCGTCGC GCCCGGCAAG
CGGGCGGCCC TGACCGTCCT CGACGGCGAC TCGGACAATC TGGCCGGCTC ACGCCACCCC
GTCGAGAGCG TCGTCCGGCG CGCGACCGCG CTGGACGTCG AGCGCGTGAT CTGTTAG
 
Protein sequence
MPALEGTVLV GESFEPVTGR VVVEDGRIEA VEETDTASTD IILPAFVNAH THLGDAVAKD 
AAVGLSLDAA VAPPDSLKHR RLADADRAEL VTAMRRTLRF MQRTGTVSTL DFREFGREGA
RTLREAAEPL SIDPFVFGSG DASVLDVADG FGASGANDDD FGPQRDAAAD RGVPFAIHAG
EPDQTDIHPA LDLEPDLLVH MVHAAGEHLE RVAEQSVPVA VCPRANTVLG VGRPPIRDLL
DHTTVALGTD NVMLNPPSMF REMAYTVRQF DVSAREVLRM ATTAGAEIAG LDCGVVAPGK
RAALTVLDGD SDNLAGSRHP VESVVRRATA LDVERVIC