Gene Hmuk_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0889 
Symbol 
ID8410404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp857507 
End bp858157 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID645019224 
Producthypothetical protein 
Protein accessionYP_003176726 
Protein GI257386953 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.231937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.86542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACACCT TCCGTGACCT GGCGACGGCG GCGTACTGTC CGCGAAAGCT CTACTACCGA 
CGGCGCGACG GCGAGCCCAC GATCCCCGAC GGCGTCGACG ACGTGCGACG GCTGGCCTTC
GAGTACGACA CTCTCCGGTC GGTCGACGCG GCGCTGCTCG CCGCTCCCAT CGAGGTCTCG
CCCGGCACCT ACCGCGAGCG GCTCGGGCGG CTCGCACGGC GGCTCGACTA CTGGGACGCG
CTCGTCGACC CGCCGCGACG CGACGCCCTC CTGACCGGCC GGGAGTGTCG CGGGATCGCT
CACAAGGTGC TCGAAGCGCC GCTCGTCCCG TCGCTCGTCT TCGCCGGTGA GCCGCCCGAC
GAAGGCGTCT GGGAGCCCCA GACCGTCCGG CTCGTGGCCG CGGCCAAGGC CCTCGCCTGG
GAGCACGAGA CGACGGTCGA GCGGGCCGTC GCCGAGTATC CGGCCTACGG CGTCGTCCGC
GAGATCGACC TGACGGTCAG GCGGAAAGCG GCCTACAGGA AGGCCGTCAG GACGGCCGAG
ACGATCGACG GCCCGCCCTC GCGTGTCGAC AGCGACGCGA AGTGTGCCCC CTGCGAGTAC
CGCGAGACGT GTGGCACGAC GACCCGCTCG CTTGCGAGCA TGCTCTCGTA G
 
Protein sequence
MHTFRDLATA AYCPRKLYYR RRDGEPTIPD GVDDVRRLAF EYDTLRSVDA ALLAAPIEVS 
PGTYRERLGR LARRLDYWDA LVDPPRRDAL LTGRECRGIA HKVLEAPLVP SLVFAGEPPD
EGVWEPQTVR LVAAAKALAW EHETTVERAV AEYPAYGVVR EIDLTVRRKA AYRKAVRTAE
TIDGPPSRVD SDAKCAPCEY RETCGTTTRS LASMLS