Gene Hmuk_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0887 
Symbol 
ID8410402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp856308 
End bp856823 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID645019222 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003176724 
Protein GI257386951 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.344383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTCG ATTTCGACGT GGTCGATCTC GGTCCCGCAG ACCACCCCGA GGTAGGCGAG 
CGAGCCCCCG ACTTCACCCG TCCGCTGGTC ACCGACGAGT ACTGGGCGGA CGTGTCCCTG
TCCGAGCTGG TCGCCGAGGA CGACGATCCG ACGGTGCTGG TCTGTCACTC CATGGACGGG
GCCTTCCCGG CGACGTACGC CTGGAACGAG ATCCGCGAGC GCGAGTGGCA CGCCGACGCC
ACCGTCGTCG GCCTGTCGAT CTCGACGCCG TACGCCCACA AGCGCCTGCT CGACGAGCGA
GAGCTGGGCG ACGACTACCG GCTGTACTCC GATCCCGCCA ACGGCGTCGC CGAGGCGTAC
GGCATCGTCA ACGATCTCGA CGGGATGAGC GGCGTGGCCG AGCCCCGGCC GGCCGTGTTC
GTCCTCGATA GCGACCGGAC GATCGAGTAC GCCTGGGTCG CCACGGAGTG GCCCGACTTC
CCGGACTACG ACGCGGTCGA GGCGGTCATC CGATAG
 
Protein sequence
MELDFDVVDL GPADHPEVGE RAPDFTRPLV TDEYWADVSL SELVAEDDDP TVLVCHSMDG 
AFPATYAWNE IREREWHADA TVVGLSISTP YAHKRLLDER ELGDDYRLYS DPANGVAEAY
GIVNDLDGMS GVAEPRPAVF VLDSDRTIEY AWVATEWPDF PDYDAVEAVI R