Gene Hmuk_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0885 
Symbol 
ID8410400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp854514 
End bp855926 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID645019220 
Productprotein of unknown function DUF21 
Protein accessionYP_003176722 
Protein GI257386949 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.182877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.402091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTG ACCCCCCTGT CGGAGTCGAT TCACTGGTAG CCTTGCCACT ACAGGTCGAC 
ATCTACGGTC CCGTCCAACT GCCCGAGAAC GTGTTTCTCG GGATCGGTGC GGGGATCATT
CTCCTCTTGA TCGGGCTGTC GGCGTTTTTC TCCTCGTCGG AGATCGCCAT GTTCTCGCTG
CCCAGCCACC GCGTCGAGGC CCTCGTCGAG GACGCCGTCC CCGGGTCGAA GACCCTCAAA
GGGCTCAAAG AGGACCCACA CCGGCTGCTG GTGACGATTC TGGTGGGGAA CAACCTCGTC
AACATCGCGA TGTCCTCGAT CGCGACGGGG CTGTTGACGT ACTACCTCGG GAGCGGCCAG
CAGGGCCTCG CGGTCGCGCT CTCGACGTTC GGGATCACCG CGATCGTCCT GCTGTTCGGC
GAGAGCGCGC CCAAGAGCTA CGCCGTCGAG AACACGGAGT CGTGGGCCCT GCGGATCGCC
AAGCCGCTGA AGTTCTCCGA GAAGGTCCTG TTGCCCCTGA TCGTCCTGTT CGACTATCTC
ACTCGAATCG TCAACAAGGT CACCGGCGGC CGCTCGGCCA TCGAGACCTC GTACGTCACT
CGCGAGGAGA TCCAGGACAT CATCGAGACC GGCGAGCGCG AGGGCGTCCT CGACGAGGAG
GAACGCGAGA TGCTCCAGCG GACGCTGCGG TTCAACAACA CGATCGCCAA GGAAGTGATG
ACGCCGCGAC TGGACATGGA GGCCATCTCG AAGGACGCCT CCGTCGAGGA GGCGATCCAG
CAGTGCGTCC AGAGCGGCCA CGCCCGCGTG CCGGTGTACG AGGGGAGTCT CGACAACGTC
ATCGGCATCG CACACCTGCG GGACCTGGTC CGGGATCGGG ACTACAGCGA CGCAGAGACC
GCACTCGCGG ACCTCATCGA ACCGACGCTG CACGTTCCCG AGTCGAAAAA CGTCGACGAC
CTCCTGACGG AGATGCGCCG CGAACGGCTC CACATGGTCA TCGTCATCGA CGAGTTCGGC
ACCACCGAGG GACTGGTGAC GATGGAGGAC CTCACCGAGG AGATCGTCGG CGAGATCCTC
GAAGGCGAGG AAGAAGAGCC GATCGAGTTC GTCGGCGACG GCGAGGTCGT CGTCAAAGGC
GAGGTCAACA TCGAGGAGGT CAACGAGGCG ATGGACCTCG AACTGCCCGA GGGCGAGGAG
TTCGAGACCA TCGCCGGCTT CATCTTCAAC CGCGCGGGCC GCCTCGTCGA GGAGGGCGAA
CGCATCGAGT TCGACAGCGT CGAGATCGTC GTCGAGCGGG TCGAGAACAC CCGCATCATG
AAGGCGCGAC TGTCGCGTAT CGAGCCCGAA GACGGCGAGA ACGGCGAGAC CGAGAGCGAT
GGCGACACGT CCACACAAAC GCCGACCGAG TGA
 
Protein sequence
MALDPPVGVD SLVALPLQVD IYGPVQLPEN VFLGIGAGII LLLIGLSAFF SSSEIAMFSL 
PSHRVEALVE DAVPGSKTLK GLKEDPHRLL VTILVGNNLV NIAMSSIATG LLTYYLGSGQ
QGLAVALSTF GITAIVLLFG ESAPKSYAVE NTESWALRIA KPLKFSEKVL LPLIVLFDYL
TRIVNKVTGG RSAIETSYVT REEIQDIIET GEREGVLDEE EREMLQRTLR FNNTIAKEVM
TPRLDMEAIS KDASVEEAIQ QCVQSGHARV PVYEGSLDNV IGIAHLRDLV RDRDYSDAET
ALADLIEPTL HVPESKNVDD LLTEMRRERL HMVIVIDEFG TTEGLVTMED LTEEIVGEIL
EGEEEEPIEF VGDGEVVVKG EVNIEEVNEA MDLELPEGEE FETIAGFIFN RAGRLVEEGE
RIEFDSVEIV VERVENTRIM KARLSRIEPE DGENGETESD GDTSTQTPTE