Gene Hmuk_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0872 
Symbol 
ID8410387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp841912 
End bp842601 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content57% 
IMG OID645019207 
ProductABC transporter related 
Protein accessionYP_003176709 
Protein GI257386936 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0610304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAATG ACGCACCAGA CCTCGTGGTC GACGGTCTCA CAAAGCGTTT CGACGACGGT 
GCGGTGACCG CGGTGGACGA CCTGTCGTTC ACCGTCGAAC CCGGCTCGGT GGTGGGGCTG
CTCGGTCCGA ACGGGGCGGG GAAGACGACG ACGATCAAAT CCATACTCGG GCTGGTGATT
CCGGATTCGG GATCTGTCGA GGTCGGTGGC GTCGACGTTC ACGACCGTCC TCGACTCGCC
CACCGACAGA TCGATGCGAT GCTCGAGGGG GCGAGGAACA ACTATTGGCG ACTGACCGTC
GAGGAAAATC TGCGTTATTT TGCCGGAATT AGCGGTCTGG ATCCAGATGC CGTTCTCGAA
GAGTGTGACG AGATTCTCCA GCGGTTTGAA ATCGATGAGA AGCGCGACGA GGTGGTCCGG
AATCTCTCGC GCGGAATGAA ACAGAAAGTT TCGCTGGCCA GCGTCCTCGT CACCGACGCA
TCGATCGTCT GTATCGACGA ACCAACACTC GGTCTGGACG TTGAAAGCAC CAGGCAACTC
AAGAAAGAAC TCCGAAACAC GATCGACCAG CAGGACATGA CGGTACTGCT TTCGAGTCAC
GATATGGACG TCATTGAGGA CGTCTGTGAT CGAGTTATTA TCATGCACGC TCTTGCGAAG
GAGATTGTTG ATAGCGATGG CTGGAGCTGA
 
Protein sequence
MSNDAPDLVV DGLTKRFDDG AVTAVDDLSF TVEPGSVVGL LGPNGAGKTT TIKSILGLVI 
PDSGSVEVGG VDVHDRPRLA HRQIDAMLEG ARNNYWRLTV EENLRYFAGI SGLDPDAVLE
ECDEILQRFE IDEKRDEVVR NLSRGMKQKV SLASVLVTDA SIVCIDEPTL GLDVESTRQL
KKELRNTIDQ QDMTVLLSSH DMDVIEDVCD RVIIMHALAK EIVDSDGWS