Gene Hmuk_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0851 
Symbol 
ID8410366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp823272 
End bp824681 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID645019187 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003176689 
Protein GI257386916 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0355773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC CGGTCGATCG CGTGCTCCTC GACTACGCGC AGGACAAGAT CGCGGTCGTC 
GACCGGGACG GGACCTACCA GTACCTCAAT CGAGCGGCCA AGACGATCCT CGGGTACGAT
CCAGACGATC TGATCGGCGA GAACGCCTTC GAGTTCATGC ATCCGTCCGA TCGGGACTAC
GTTCGGACCC GCTTCGAGGA GACGATCGCC GTCGACGACG AGTTCCTCGA CGTGACCGTC
GAGTACCGCC ACCGCCAGCG CGAGGGGGGA TGGGTGTGGC TGGAGAGTCG GATGTCTAAC
CTGACGGACT CGGAGCTGGG CGGCTACGTC GTCAGCTCGC GCGATATCTC GGATCGGGTC
ACTGCCGAAC GCGAGCGCGA CGAAACCGAG ACGCGACTCC GGGAGCTAGC GGCCAACACC
GACGACGTGC TCTGGATGTT CAGCGGGGAC TGGTCGGAGC TGCTCTTTCT CAACCCCGCC
TACGAATCCG TCTACGGCGG CTCGGTCGAC GCCATCGAGG CGGATACGGA CGCGTTTATG
GACTGTGTCT ATCCCGACGA CGTGCCCGCC GTCGAGCGCT CGATGGCGGC GCTCTCCCGT
GGCGAATCGG TCGACATGGA GTACCGGGTC AACCCGGGCG AGAACTACAA CCGCTGGGTG
TGGGTCCAGG CGGAGCCGAT CGTCGAGGAC GGGGAAGTCG TTCGCATCGT CGGCTTCACC
AGAGACGTGA CCGATCGCAA CCGCCGGGAG CGCCAGCTCG CAGTCGTCGA CAACCTCCTG
CGCCACAACA TCCGCAACGA CATGACGACC ATCCTCGGGC AGGCGGAGCT GATCGCCGAC
GATCCCGAGG TCGACGCCCC GGAGCGGGCC GCAGTCATCC GGCGGGTCGG CGAGGCACTC
CTCCAGACGA CCGAAAAACA GCGCGAGACG ATCCACCTCT TTCGGTCGCC CGCCTGCCCG
ACGACCGTCG ATATGACCGA GGCCGTCGAC GCCGCGCTCG CGAGCGTCCG CGTTCGCTAC
CCGGCAGCCA CCGTCGAGAC GACACTCTCT CCCGAGCTCG TCGCCAGTGC GCTGGCGGAA
GTCGAAGTCG CGCTCTCGGA GCTGATCGAG AACGCCGTCA AACACGCCGA GAGCGACGCT
CCGACCGTCC GGATCACCGG CACCGTTCGC GACGACGAGA TCGTGATCGT GATCGACGAC
GACTGCCCGC CCCTGCCGGA GTTCGAGTAC CGCGTGCTGA CCGGCGACAA ACCGATGAGC
GACGTGTACC ACAGCACCGG GCTGGGACTG TGGCTGGTCT ACTGGATCGT CGATCTCTCG
GACGGCCGGA TCGAGTTTAC CACCAACGAC GAGACGGGCA ACACGATCAC CGTCGTCCTG
CCGCGTGCGG CCGCTCCAGC GCCGGAGTGA
 
Protein sequence
MNRPVDRVLL DYAQDKIAVV DRDGTYQYLN RAAKTILGYD PDDLIGENAF EFMHPSDRDY 
VRTRFEETIA VDDEFLDVTV EYRHRQREGG WVWLESRMSN LTDSELGGYV VSSRDISDRV
TAERERDETE TRLRELAANT DDVLWMFSGD WSELLFLNPA YESVYGGSVD AIEADTDAFM
DCVYPDDVPA VERSMAALSR GESVDMEYRV NPGENYNRWV WVQAEPIVED GEVVRIVGFT
RDVTDRNRRE RQLAVVDNLL RHNIRNDMTT ILGQAELIAD DPEVDAPERA AVIRRVGEAL
LQTTEKQRET IHLFRSPACP TTVDMTEAVD AALASVRVRY PAATVETTLS PELVASALAE
VEVALSELIE NAVKHAESDA PTVRITGTVR DDEIVIVIDD DCPPLPEFEY RVLTGDKPMS
DVYHSTGLGL WLVYWIVDLS DGRIEFTTND ETGNTITVVL PRAAAPAPE