Gene Hmuk_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0834 
Symbol 
ID8410348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp806439 
End bp807650 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID645019169 
Productthreonine dehydratase 
Protein accessionYP_003176672 
Protein GI257386899 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTT TCGATGACGT GCTGGCCGCC CGCGATCGCG TCGCCGAGAC GGCTCGACAC 
ACCCCGCTCG ACTACTCGCA CACCTTCTCG TCGATGACGG GCGCAGACGT ACACCTCAAG
CTCGAACTGT TCCAGCGGAC CGGCTCGTTC AAGATCCGCG GCGCGACCAA CCGGATCGCG
ACACTGTCGG AGGGAGAACG CGAGGCGGGC GTCGTCACCG CCAGCGCGGG CAACCACGCC
CAGGGCGTGG CGCTGGCGGC GACCCGTATC GGCGTCGATT CGACGATCGT CATGCCCGAA
CGCGCCCCCG TCTCGAAGGT CCAGGCCACC GAAAGTTACG GTGGGAACGT GGTCCTCCAC
GGGCGAGACT ACGACGCGGC CGCCCAGAAG GCCCACGAGA TCGAGCGCGA GTCCGGCCGG
ACCTACGTCC ACGCCTTCGA CGACGAGATG GTGATGGCCG GCCAGGGGAC GATCGGACTG
GAGATCTACG AGGACCTGCC CGGCGTCGAC ACCGTCGTCG TCCCCATCGG CGGCGGCGGC
CTCATCAGCG GGATCGCGAC GGCGCTGAAG GGCCAGGACG ACGACGTGCG CGTGATCGGC
GTGCAGGCAG ACGGGGCGTC CAGCGTCGCC GAGTCCCTGA AGAAGGGCCA CCGGATCGAA
CGCGATTCGG TCCAGACGAT CGCCGACGGG ATCGCGACCC GGACCATCGG CGACCGGACG
TTCGAGGTGA TCGAAGAGCG CGTCGACGAG GTCGTCACCG TCACCGATCC GGAGATCGCC
GTCGCGCTGA CGACGCTGCT GGAGCGGTCG AAGACGCTGG CCGAGGGAGC GGGCGCGGTC
CCGCTTGCGG CCCTGCTCGA AGGGAAGTTC GACTACGAGG ACGACGAGAC GATCGTTCCG
ACGCTCTGTG GGGGCAACAT CGACCTGAAC ACGCTGACGA ACGTCATCAT GCGAGGGCTG
GTCGAGACCG GGCGGTACTG CAAGATCAGG ACCGTCCTGG AGGATCGGCC GGGCTCGCTG
GAGGAACTGG TCGAGGTGCT GTCGGCGGCC CAGGTCAACG TCTACGGCAT CGAGCACGAC
CGGACCTCGC GGGACATCGC CATGAACGAC GCCGAGGTCG AGTTGGACTT GGAGACGCGG
GGGCCGGACC ACGTCGCGGA GCTGCTCGAT CGGCTCGAAG ACGCGGGCTT CGAGGTCGAA
GTCCTGGTGT AG
 
Protein sequence
MLAFDDVLAA RDRVAETARH TPLDYSHTFS SMTGADVHLK LELFQRTGSF KIRGATNRIA 
TLSEGEREAG VVTASAGNHA QGVALAATRI GVDSTIVMPE RAPVSKVQAT ESYGGNVVLH
GRDYDAAAQK AHEIERESGR TYVHAFDDEM VMAGQGTIGL EIYEDLPGVD TVVVPIGGGG
LISGIATALK GQDDDVRVIG VQADGASSVA ESLKKGHRIE RDSVQTIADG IATRTIGDRT
FEVIEERVDE VVTVTDPEIA VALTTLLERS KTLAEGAGAV PLAALLEGKF DYEDDETIVP
TLCGGNIDLN TLTNVIMRGL VETGRYCKIR TVLEDRPGSL EELVEVLSAA QVNVYGIEHD
RTSRDIAMND AEVELDLETR GPDHVAELLD RLEDAGFEVE VLV