Gene Hmuk_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0816 
Symbol 
ID8410330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp786617 
End bp787264 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID645019151 
Productsignal sequence peptidase 
Protein accessionYP_003176654 
Protein GI257386881 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.019446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC CACGCGGTCC GAACCCGCCC GACGACGACC AACCGGGCGG GCTCGTCTAC 
CTGTTCGATC TCGTCAGCAG TGCCGGCGCA GTCGTCGCAG TCGGACTGTT GCTGTTCGCG
ATCAGCGGCG TGTGGCCGCC GCTGGTCGCG ATCGAGTCCG GTAGCATGGA ACCACACATC
GACACCGGCG ACCTCGTCTT CGTCATGGAC GAAGACCGCT TCGCCGGTGA GGGAGCCTAC
GCCGACACCG GCGTCGTGCC CGCAAATCGC GGCGCTGACA CCGGCTACAG GTCGTTCCAG
AACGACGGCG ACGTGATCGT CTTCCAGCCC GACGGCGACG GAGCGTCCAC ACCAGTGATC
CACCGAGCGA TGTTCTGGGT CAACGAGAGC GAAAACTGGT ACGACAAGGC GGATCCCGCC
TACATCAACG CCGACAGCTG CGAGGAACTG CGCAACTGCC CGGCCGACTC GGCCGGCTTC
GTGACGAAAG GTGACAACAA CGCCGGCTAC GACCAGGTCA ACGGGCTGCC GAGCTGTGGC
CCCGGTGCCT GCGATCCGGT CCGAAAGTCC TGGGTCGTCG GGACCGCCGA GACGAGAGTG
CCACTACTGG GCAACATCCG GCTCCAACTC CAGCGAGCGC TGGCCTGA
 
Protein sequence
MSEPRGPNPP DDDQPGGLVY LFDLVSSAGA VVAVGLLLFA ISGVWPPLVA IESGSMEPHI 
DTGDLVFVMD EDRFAGEGAY ADTGVVPANR GADTGYRSFQ NDGDVIVFQP DGDGASTPVI
HRAMFWVNES ENWYDKADPA YINADSCEEL RNCPADSAGF VTKGDNNAGY DQVNGLPSCG
PGACDPVRKS WVVGTAETRV PLLGNIRLQL QRALA