Gene Hmuk_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0815 
Symbol 
ID8410329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp784949 
End bp786499 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content62% 
IMG OID645019150 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_003176653 
Protein GI257386880 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00880215 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA CAGGAAACGA CGCCGACCCG AACACGCCGG ATCGAGAGTC CTCAGAGGAG 
ACCGACGACG ACCAGCCCGA CCGCGACAAC TTCGGGACGG ATCTCGACGA CGTGGTGCTG
GACGACATCG ACACGGGTGA GGACGGGGCC ACTGACGAGG CGTCCCGTGG CCTCTTCGAC
GACCTTCTCA GCGGCGAGCC GATCTTCGAG AACAAGGAAG TTCTCCGTCC CTCGTACACA
CCACACAAGC TCCCACACCG GGAAGAGCAG ATCAACAACA TCGCGACGAT CCTCGTCTCC
GCTCTCCGTG GAGACACGCC CTCGAACATC CTCATTTACG GGAAGACGGG GACCGGAAAG
ACTGCCAGTG CCAAGTTCGT CAGCGAGGAA CTGGAGACGA CCTCACAGAA GTACGAAGTC
CCCTGTATGG TCGAGTACAT CAACTGCGAG GTGACCGACA CGCAGTATCG CGTCCTCGCA
CAGCTCGCCA ACAAGTTCAT CGAGCAGAAC CGGACGTACA TCGGCGATCG CATCGAGGAA
CTCGATACGC TTCGCGAACG CGCGACCTCG AACCCGGACG GGGACCTACT CGCCGAGACC
GACTTCGCGA CCGTCGACGA GATCGACGCC GAAATCGAAC GGCTCGAAGC CGATCGCGCG
GAGTTCGAGG AAGTGCCGAT GACCGGGTGG CCGACCGATC GGGTGTACAG CTCGTTTTTC
GACGCCGTCG ACTACCACGA ACGCGTCGTC GTCATCATGC TCGACGAAAT CGACAAGCTC
GTCGAGAAGT CGGGCGACGA CACGCTGTAC AACCTCTCGC GGATGAACTC CGAGCTCGAA
CGCTCGCGGG TGTCGATCAT GGGCATCTCG AACGACCTGA AGTTCACCGA CTTCCTCGAT
CCCCGCGTCA AGTCCAGCCT CGGCGAGGAA GAGATCGTCT TCCCGCCCTA CGACGCCACG
CAGCTCCGGG ATATCCTCGA TCACCGCTCC GACGTGGCGT TCAAGTCCGA CGCACTGACT
GACGACGTGA TTCCGCTCTG TGCCGCCTTC GCGGCCCAGG AACACGGCGA CGCTCGGCGA
GCGCTCGACC TGCTCCGGAC GGCCGGCGAA CTCGCGGAAC GGGACCAGAC CGACTGCGTC
GAGGAAGACC ACGTCCGACA GGCCCAGGAG AAGATCGAAC TCGACCGGGT CGTCGAGGTG
GTGCGGACGC TGCCGACCCA GAGCAAGATC GTCCTCTTCG CGATCATCCT CCTGGAGAAA
AACGGCGTCC ACAACATCAA CACCGGGGAA GTGTTCAACA TCTACAAACG GCTCTGCGAG
GAGATCGACG CCGACGTGTT GACTCAACGT CGCGTCACCG ATCTCATCAG CGAACTCGAC
ATGCTGGGGA TCGTCAACGC CGTCGTCGTC TCGAAAGGGC GCTACGGCCG GACCAAAGAG
ATCAGCCTCT CGGTCCCCAT CGACGAGACC GAGGCCGTCC TGCTGTCGGA CTCCCGGCTC
GGTGACATCG AGGACGTGCA ACCGTTCGTT CAGGCCCGGT TCGACAACTG A
 
Protein sequence
MDETGNDADP NTPDRESSEE TDDDQPDRDN FGTDLDDVVL DDIDTGEDGA TDEASRGLFD 
DLLSGEPIFE NKEVLRPSYT PHKLPHREEQ INNIATILVS ALRGDTPSNI LIYGKTGTGK
TASAKFVSEE LETTSQKYEV PCMVEYINCE VTDTQYRVLA QLANKFIEQN RTYIGDRIEE
LDTLRERATS NPDGDLLAET DFATVDEIDA EIERLEADRA EFEEVPMTGW PTDRVYSSFF
DAVDYHERVV VIMLDEIDKL VEKSGDDTLY NLSRMNSELE RSRVSIMGIS NDLKFTDFLD
PRVKSSLGEE EIVFPPYDAT QLRDILDHRS DVAFKSDALT DDVIPLCAAF AAQEHGDARR
ALDLLRTAGE LAERDQTDCV EEDHVRQAQE KIELDRVVEV VRTLPTQSKI VLFAIILLEK
NGVHNINTGE VFNIYKRLCE EIDADVLTQR RVTDLISELD MLGIVNAVVV SKGRYGRTKE
ISLSVPIDET EAVLLSDSRL GDIEDVQPFV QARFDN