| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0699 |
|---|
| Symbol | |
|---|
| ID | 8410213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 668511 |
|---|
| End bp | 670187 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645019034 |
|---|
| Product | thermosome |
|---|
| Protein accession | YP_003176537 |
|---|
| Protein GI | 257386764 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.758666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.97393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGTC AGCCCATGAT CGTGCTGGGA GAGGACTCCC AGCGAACCTC CGGAAAGGAC
GCACAGTCGA TGAACATCAC GGCCGCACAG GCCGTCGCGG AGGCCGTACG GACGACACTC
GGCCCGAAGG GCATGGACAA GATGCTCGTC GACGACTCCG GCGGCGTCGT CGTCACCAAC
GACGGTGTCA CCATCCTCGA CGAGATGGAC ATCGAGCACC CCGCGGCCAA CATGATCGTC
GAAGTCGCCC AGACCCAGGA AGACGAGGTC GGCGACGGCA CGACGACCGC GGTCGTCATC
TCCGGCGAAC TCCTCTCGGA AGCCGAGGAC CTCATCGACC AGGACATCCA CGCCTCCATC
CTGGCACAGG GGTACCGCCA GGCCGCCGAG AAGGCAAAGG AGATCCTCGA AGAGCAGGCC
ATCGAGGTCG GCCCCGAGGA CACCGAGATG CTCAAGAAGG TCGCCGCGAC GGCGATGACC
GGCAAGGGCG CGGAATCCTC CAAGGACGTC CTCGCCGAAC TCGTCGTTCG CGCCGCACAG
TCCGTCGCCG ACGACGGCGA GGTCGACACC GACAACATCC AGCTCGAGGT CGTCGTCGGT
GGCTCCACCG ACGAGTCAGA GCTCGTCGAG GGCGTCATCA TCGACAAGGA GCGCGTCCAC
GACAACATGC CCTACGCCGT CGAGGACGCC AACATCGCGC TGCTCGACAC CGCGATCGAG
GTCCCCGAGA CCGAACTCGA CACCGAAGTC AACGTCACTG ACCCGGACCA GCTCCAGCAG
TTCCTCGACC AGGAAGAGGA GCAGCTCAAG GAGATGGTCG ATGACCTCAA AGCGGCCGGT
GCCGATGTCG TCGTGACCCA GAAGGGCATC GACGACATGG CCCAGCACTA CCTCGCACAG
GAGGGCATCC TCGCCGTCCG CCGTGCGAAG AAGTCCACCA TCAAGGCCCT CTCGCGCTCG
ACCGGCGCTC GCATCGTCTC GAACATCGCC GACGTGACCG AGGACGACCT CGGCTTCGCC
GGCTCGGTCG CCCAGAAGGA CGTTGCCGGC GACGAGCGCA TCTTCGTCGA GGACGTCGAC
GAGGCCAAGT CCGTCACGAT GATCCTCCGC GGTGGCACCG AACACGTCGC CGACGAGGTC
GAGCGCGCCA TCGAGGACTC GCTCGGCGTC GTCGCCGCCA CGCTCGAGGA CGGCAAGGTC
CTGCCCGGCG GCGGTGCCCC CGAGACACAG CTCGCACTCG GTCTGCGCGA CCACGCCGAC
TCCGTCGGTG GCCGCGAGCA GCTGGCCGTC GAGGCCTTCG CCGACGCCAT CGATGTCGTC
CCGCGCACCC TCGCCGAGAA CGCGGGTCTC GACCCGATCG ACTCGCTGGT CGACCTGCGC
AGCAAGCACG ACGGCGGCGA CAACACCGCC GGTCTCGACG CCTACACCGG CGAAGTCGTC
GACATGACCG AGGACGGCGT CGTCGAGCCG CTCCGCGTCA AGACCCAGGC CATCGAGTCC
GCCACCGAGG CGGCCGTGAT GATCCTGCGC ATCGACGACG TGATCGCTGC CGGCGACCTC
AAGGGTGGCG GCAGCGACGA CGACGAGGAC GACGCACCCG GCGGCCCCGG CGGCGCGCCC
GGCGGAATGG GCGGCGGCAT GGGCGGCATG GGCGGCGGCA TGGGCGGCAT GATGTGA
|
|---|
| Protein sequence | MQGQPMIVLG EDSQRTSGKD AQSMNITAAQ AVAEAVRTTL GPKGMDKMLV DDSGGVVVTN
DGVTILDEMD IEHPAANMIV EVAQTQEDEV GDGTTTAVVI SGELLSEAED LIDQDIHASI
LAQGYRQAAE KAKEILEEQA IEVGPEDTEM LKKVAATAMT GKGAESSKDV LAELVVRAAQ
SVADDGEVDT DNIQLEVVVG GSTDESELVE GVIIDKERVH DNMPYAVEDA NIALLDTAIE
VPETELDTEV NVTDPDQLQQ FLDQEEEQLK EMVDDLKAAG ADVVVTQKGI DDMAQHYLAQ
EGILAVRRAK KSTIKALSRS TGARIVSNIA DVTEDDLGFA GSVAQKDVAG DERIFVEDVD
EAKSVTMILR GGTEHVADEV ERAIEDSLGV VAATLEDGKV LPGGGAPETQ LALGLRDHAD
SVGGREQLAV EAFADAIDVV PRTLAENAGL DPIDSLVDLR SKHDGGDNTA GLDAYTGEVV
DMTEDGVVEP LRVKTQAIES ATEAAVMILR IDDVIAAGDL KGGGSDDDED DAPGGPGGAP
GGMGGGMGGM GGGMGGMM
|
|---|
| |