| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0629 |
|---|
| Symbol | |
|---|
| ID | 8410135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 589510 |
|---|
| End bp | 590487 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645018957 |
|---|
| Product | protein of unknown function DUF58 |
|---|
| Protein accession | YP_003176468 |
|---|
| Protein GI | 257386695 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.165682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCGA CACGCCGCGG CGCCGCGACG CTCGCCGTCG TGGGACTGGC AGTGACGATG
GCGTGGCTGT CGGGCCCGCG GTCGCTAAAC GCCGTCGCCG CGCCGCTGTC GATCGCCCTC
GCGGTCGGCG CGCTCCAGGT GACACGGGCG GGGGCACCGA CGGTCGAGCG CAGCCAACCC
CGTCGTGGCT TTCCCGGCGA GTCCCGGACC GTCTCGCTGA CGGTCGAGGG ACGCGGCGTC
GCGACGATCA CCGAGGGGCT CGCCGACGGC CTGTCGGCGG CGGCCGAATT CGAGCGGACG
CTGCCGGCGA CGGTCAGCTA CGACCTCAGG TACGACGCAC GCGGGGTCTA CGAACTCTCC
CGGACGACCG TCGCCGTCCG GGACGTGCTC GGGCTGGTCG AACAGCGCCA CGAGGTCACC
GAGCGCACGG AGGTCGTCGT CTATCCGGCG GTCTACTCAC TGGGCGGCGC GACCTTCGAG
CGGACGCTGG GACTGGACAG CGGCCAGCGC AGCGAGTTCG ACCGACTCCG CGAGTACGTG
CCCGGCGACT CGCTGCGAGA CGTCCACTGG AAGTCGAGCG CCAAACACGA CGACCTGCTG
GTGACGGAGT TCTCCGATCC CGTCGGCGGC GAGGGGATCT CGATCGCGGC ACGGTCGACC
GAGGGTCACG CCGACGAGAT GGCCGCTGGC GCGGCGACGG TCCTCGTCGG CGCGCTCCGA
GCGGGGCTGA CCACCGCGAT GACGGTCCCG GCCGGTTCGA TCGAGGCGGG CGGCGGCCAG
CGCCACCGCC AGCGGGCGCT CGAACTCCTC GCGCGGACGA GCAGCGGCGA CGTCGACGAG
ACCGCCTGGA ACCGGGCCGA CGTACGCGTC CGTGCCGACG CCACGGGCGT GACCGTCTCG
CTCGGCGACG CCGTCCACGA ACTGACGGAA CTGACGACCA CGCGCGACAA TCCGCTGGTC
GCGGAGGGTG TCTCGTGA
|
|---|
| Protein sequence | MRPTRRGAAT LAVVGLAVTM AWLSGPRSLN AVAAPLSIAL AVGALQVTRA GAPTVERSQP
RRGFPGESRT VSLTVEGRGV ATITEGLADG LSAAAEFERT LPATVSYDLR YDARGVYELS
RTTVAVRDVL GLVEQRHEVT ERTEVVVYPA VYSLGGATFE RTLGLDSGQR SEFDRLREYV
PGDSLRDVHW KSSAKHDDLL VTEFSDPVGG EGISIAARST EGHADEMAAG AATVLVGALR
AGLTTAMTVP AGSIEAGGGQ RHRQRALELL ARTSSGDVDE TAWNRADVRV RADATGVTVS
LGDAVHELTE LTTTRDNPLV AEGVS
|
|---|
| |