Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0617 |
Symbol | |
ID | 8410123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 573518 |
End bp | 574477 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645018945 |
Product | ABC transporter related |
Protein accession | YP_003176456 |
Protein GI | 257386683 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.366594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCAC CCGCAATTCG CACCCGCGAG TTGACGAAAC GCTACGGTGA CGTGCAGGCG CTTGCCGGAC TCTCGCTGAC GGTCGAGTCC GGGGAGTTCT TCGGCTTGCT CGGGCCCAAC GGTGCCGGGA AGACGACGTT CATCAACACG CTCGTCGGAC TGGTCGACGC CGACGGCGGC GAGGCGACGG TCTTCGGCCA CGACGTCGAG GACGACTACC GCGAGGCGCG CGACGCCATC GGGCTCGCGC CCCAGGAGTA CAACGTCGAC CGCTTTTTCC CCATCCACGA GGTCTTAGAG CACAAGGCGG GCTACCACGG CGTCCCCGAG GCCGAGGCCG AGGAGCGGGC CGAGGACGCC CTGAAGACCG TCGGCATCTG GGACAAACGC GACACTCGTT TCGACTGGCT CTCCGGCGGG ATGAAACGAC GGTTCATGCT CGCCCGCGCG CTGGTGTCGA ACCCCGACCT GCTGATCCTC GACGAGCCGA CGGCGGGCGT CGACGTACAG CTGCGCCACG ACCTCTGGGA GATCATCAAC CGCATGAACG ACGGCGGGAC GACGATCCTG CTGACGACCC ACTACATCGA GGAGGCAGAG CGCCTCTGTG ACCGGGTGGC GATCGTCGAC GACGGCCGGA AGGTCGAGGT CGCGACCCCC GACGAGCTGA TGGAACGGGG CACCGACACG GTCGAGATCG GCCTCGAATC GCCGCCCGCG ACCGCCCCCA CTCTCTCGGT CGAGGGCGCG CGAGACGCCC GCATGGAGGA CGAGACGCTG CTCGTCTCTG CGGCCGGCGG GAGCTCTCTC GCCCCGGCGA TCATGCGTGA ACTGGAAGCG GCGGGCCACA CCGTCACGTC GCTGGACGTA CGGCGGGCCT CCCTCGAAGA GGTGTTCGTC GACATGACGC GGGCGGACCA CGGCGGCGAC ACCGAGGTCG AGATGGAGGT CGACGCGTGA
|
Protein sequence | MTAPAIRTRE LTKRYGDVQA LAGLSLTVES GEFFGLLGPN GAGKTTFINT LVGLVDADGG EATVFGHDVE DDYREARDAI GLAPQEYNVD RFFPIHEVLE HKAGYHGVPE AEAEERAEDA LKTVGIWDKR DTRFDWLSGG MKRRFMLARA LVSNPDLLIL DEPTAGVDVQ LRHDLWEIIN RMNDGGTTIL LTTHYIEEAE RLCDRVAIVD DGRKVEVATP DELMERGTDT VEIGLESPPA TAPTLSVEGA RDARMEDETL LVSAAGGSSL APAIMRELEA AGHTVTSLDV RRASLEEVFV DMTRADHGGD TEVEMEVDA
|
| |