Gene Hmuk_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0617 
Symbol 
ID8410123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp573518 
End bp574477 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID645018945 
ProductABC transporter related 
Protein accessionYP_003176456 
Protein GI257386683 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.366594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CCGCAATTCG CACCCGCGAG TTGACGAAAC GCTACGGTGA CGTGCAGGCG 
CTTGCCGGAC TCTCGCTGAC GGTCGAGTCC GGGGAGTTCT TCGGCTTGCT CGGGCCCAAC
GGTGCCGGGA AGACGACGTT CATCAACACG CTCGTCGGAC TGGTCGACGC CGACGGCGGC
GAGGCGACGG TCTTCGGCCA CGACGTCGAG GACGACTACC GCGAGGCGCG CGACGCCATC
GGGCTCGCGC CCCAGGAGTA CAACGTCGAC CGCTTTTTCC CCATCCACGA GGTCTTAGAG
CACAAGGCGG GCTACCACGG CGTCCCCGAG GCCGAGGCCG AGGAGCGGGC CGAGGACGCC
CTGAAGACCG TCGGCATCTG GGACAAACGC GACACTCGTT TCGACTGGCT CTCCGGCGGG
ATGAAACGAC GGTTCATGCT CGCCCGCGCG CTGGTGTCGA ACCCCGACCT GCTGATCCTC
GACGAGCCGA CGGCGGGCGT CGACGTACAG CTGCGCCACG ACCTCTGGGA GATCATCAAC
CGCATGAACG ACGGCGGGAC GACGATCCTG CTGACGACCC ACTACATCGA GGAGGCAGAG
CGCCTCTGTG ACCGGGTGGC GATCGTCGAC GACGGCCGGA AGGTCGAGGT CGCGACCCCC
GACGAGCTGA TGGAACGGGG CACCGACACG GTCGAGATCG GCCTCGAATC GCCGCCCGCG
ACCGCCCCCA CTCTCTCGGT CGAGGGCGCG CGAGACGCCC GCATGGAGGA CGAGACGCTG
CTCGTCTCTG CGGCCGGCGG GAGCTCTCTC GCCCCGGCGA TCATGCGTGA ACTGGAAGCG
GCGGGCCACA CCGTCACGTC GCTGGACGTA CGGCGGGCCT CCCTCGAAGA GGTGTTCGTC
GACATGACGC GGGCGGACCA CGGCGGCGAC ACCGAGGTCG AGATGGAGGT CGACGCGTGA
 
Protein sequence
MTAPAIRTRE LTKRYGDVQA LAGLSLTVES GEFFGLLGPN GAGKTTFINT LVGLVDADGG 
EATVFGHDVE DDYREARDAI GLAPQEYNVD RFFPIHEVLE HKAGYHGVPE AEAEERAEDA
LKTVGIWDKR DTRFDWLSGG MKRRFMLARA LVSNPDLLIL DEPTAGVDVQ LRHDLWEIIN
RMNDGGTTIL LTTHYIEEAE RLCDRVAIVD DGRKVEVATP DELMERGTDT VEIGLESPPA
TAPTLSVEGA RDARMEDETL LVSAAGGSSL APAIMRELEA AGHTVTSLDV RRASLEEVFV
DMTRADHGGD TEVEMEVDA