| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0582 |
|---|
| Symbol | |
|---|
| ID | 8410088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 545885 |
|---|
| End bp | 547087 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645018910 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_003176421 |
|---|
| Protein GI | 257386648 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.812129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAC GGACGTTCCT GACGACGACC TGTGCCGGAA CGGCGGCCCT CTCTGGGTGT
CTGTCCTCGC TTCCGTGGAC GAGCGGGGGG AACACGCCAC TGCCAGAGGT CCCCGGCGGC
TCCTGGACAC AGCACGGAGC CGACGCCGCC AACACGTTCG CCCCGGACGT TGCCGCGCCC
TCGCGGGCGA GCCACGCCTG GACATCGGCG GCGTTCACGC GCTGGGACCC AGTTATCGCC
GACGGGACGA TCTACACCAC GAACTTCGAC CCCAGCCACG ACGGCAGCGC CATCGCGCTC
GACGCACAGG ACGGCACCGA ACGGTGGCGC ACGACGCTCG ACAGGGAGGG TCGTCACGGG
CGCGCCCTCG TCGACGGCCG GTTCGTCGTG GCACACGACT CGGGACTCGT CGCCCTCGAC
CGACAGGGGG GAGGCGTCGA CTGGGAGCGC TCCGTCGAGG GGCTCGAAAC GTCGTTCGCG
GAACTGCTCG CCGTCGACCG CTCGACGGGG ACGATCGTCG TCCCGTACGC CGACGGCCTC
AAGGCATTCG GAGCGACAGA CGGCCAACGG CGCTGGAAAG CGCCCGAACT GCCGGGCCAG
CGGGTCACAC CCGCCATCGC CGACGGGACG GTCTACGCCG TCGGCAGCGT CGACGGGGCG
GCCACTCTCG CCGCGCTCGC GCTCGCCGAC GGATCGGTCC GCTGGACGCG CTCGCTCGAC
GGTCGGTCCC CGAGCGCGCC GGTCGTGACC GACCGCGGCG TCCTCGTCGT CGACGACCGA
ACGCTCGTCG TCCACGACCG GGAGACGGGC GACCGCCGCG GCGAACGCCA CTCGTTCGAC
TACGACGGGA CGACCTTCGA CGCGACGGTC GCTACCGACG GCACTACGGC GTTCGTGACC
AGCGACGACG GACTCACCGC CGTCGACATC GCCGACGGAA CGACGCGGTG GGAGTACGAC
GAGTGGGTGT ACACCGCCGG CTGCTCGGTC GGGACCGAGA CCGTGGTCGC GATGGCCGAC
CGCGGCGAGT ACACCGACCG GACGATCACC GCGTTCGACC GCGAGACGGG CGAGGCGCGC
TGGGACTACG TGATGGACGA CTTCCACACG CCCTCGATCC CGCCGATCCT CGCCGACGGG
GCCGTGTTCT TCGCGACCAG CAGCAGCGAC GGCCTCGTCG CCATCGGGGA CGTTCCGGAG
TAG
|
|---|
| Protein sequence | MDRRTFLTTT CAGTAALSGC LSSLPWTSGG NTPLPEVPGG SWTQHGADAA NTFAPDVAAP
SRASHAWTSA AFTRWDPVIA DGTIYTTNFD PSHDGSAIAL DAQDGTERWR TTLDREGRHG
RALVDGRFVV AHDSGLVALD RQGGGVDWER SVEGLETSFA ELLAVDRSTG TIVVPYADGL
KAFGATDGQR RWKAPELPGQ RVTPAIADGT VYAVGSVDGA ATLAALALAD GSVRWTRSLD
GRSPSAPVVT DRGVLVVDDR TLVVHDRETG DRRGERHSFD YDGTTFDATV ATDGTTAFVT
SDDGLTAVDI ADGTTRWEYD EWVYTAGCSV GTETVVAMAD RGEYTDRTIT AFDRETGEAR
WDYVMDDFHT PSIPPILADG AVFFATSSSD GLVAIGDVPE
|
|---|
| |