Gene Hmuk_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0567 
Symbol 
ID8410073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp536749 
End bp537534 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID645018897 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_003176408 
Protein GI257386635 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.584768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTCA CCGACACGCA GTTCGAACAG TACCAGCGAG ACGGCTACGT CGTCGTCGAG 
GACGCCCTCG ACGCCGAGAC GGTCGACCGC GTGAAGCGAC GCCTACGAGC CTACACTCAC
GGCGACCGCG CCGTCGAGGG GTTCCAGTCA CAGATCGAGC CGGCCGTCGA ACGCGGCGAG
GTCGATGTCG AGGAATCGGG CGACGCGGTG CGGAAGTTCG AGGGACTGGG GATGGTCGAG
ACCGACGACG TGTTCCGATC GGTCGCCGAC GACGACACGA TCGTCGACAC GGCCGCCGAA
CTGCTCGGGC CGAACCTGAA GCTCCTGCGC AGCGCCGCGA TGTTCAAACC CCCCGCGGTC
GGGAGCGAGA AGGGGTTCCA CCAGGACGCC GCGTACTACC CGATCCAGCC GATGGACCAC
GTCACCGTCT GGATCGCGCT CGACGAGGCG ACGACCGAGA ACGGCTGTAT GAACGTCGTT
CCCGGCGCAC ACACGGACGG ACTGCTTGGC CACGAGGCCG CCGACTACGA CACCGACATC
GTCATCGCCG AGGGCGACGT GGACCGGGCC GACGCCGTCC CCGTCCCGAT GGAACCGGGC
GACGCGCTGT TCGCTCACTG TCTGGTCCCT CACTTCACCG CGCCCAACAC GACCGACCAG
TGGCGGCGCG CGCTCATCAT GTCGTACATG GACGCCCGTT CGCGGTTCAC GAAATCGGCC
GCGGAGCGTC CGCCGTGGGT CGACTCCGTC CACATCCGGG GCGAGGACTT TCCCGGGTGC
GTGTGA
 
Protein sequence
MTLTDTQFEQ YQRDGYVVVE DALDAETVDR VKRRLRAYTH GDRAVEGFQS QIEPAVERGE 
VDVEESGDAV RKFEGLGMVE TDDVFRSVAD DDTIVDTAAE LLGPNLKLLR SAAMFKPPAV
GSEKGFHQDA AYYPIQPMDH VTVWIALDEA TTENGCMNVV PGAHTDGLLG HEAADYDTDI
VIAEGDVDRA DAVPVPMEPG DALFAHCLVP HFTAPNTTDQ WRRALIMSYM DARSRFTKSA
AERPPWVDSV HIRGEDFPGC V