Gene Hmuk_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0552 
Symbol 
ID8410055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp523052 
End bp524071 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID645018879 
Producthypothetical protein 
Protein accessionYP_003176393 
Protein GI257386620 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACA GACGCCGTGA TCCGGTTTCG GTCCGCGACG ACGGGTCACA GGACCTCTAC 
GACGTTTCAG AGTGGGAAGT CAGGTCGTGG CTCGACCGCG TCGCGTGGCT CTGCTACGCC
GCGCTGGTGT ACTCGCTGCG CGGGTTCGTC GTGCTCGCGG CGATCGCGAT CTTGCTCTCG
CAGTTCCTCG TGGGCGGTCT CGGCGCGCTG TCGAATCCGG TACTCGGCGC GTTCACGGTG
CTGTCCGCGG TCCCGGCGCT GGCACTGGCC GCCTACGCCT GGCACACCGA CGTGACGACC
AAAGAGCCAC TGGCGTTGCT CGTCGCGACG TTCGTCCTCG GAGTGTTGTT CGCCAGTTTC
GCCGGGATCG CCAACAGTGG CCTCGGCCCC GCAGTCCAGG GGATCGGGTC GGGCTTTCTG
GCGTCGATCG TCGGCACCGT CCTCTTTTAC TTCCTCGTCG TCGGCCCGGT CGAGGAGGGC
GTCAAGCTGC TGTCGGTGCG ACTGGTCGCC TACCGGAGCG ACCGCTTCGA CGCCGTCATC
GACGGAGCGG TGTACGGTGC AGTCGCCGGA CTGGGCTTCG CGACGATCGA GAACGCGCTG
TACATCACCC AGAACGCCGA CGCTGGCGTG ACCGTCGCCA ACGCCGTCAT GGAAGCCGGC
TCGATCACGT TCCTGCGCTC GCTGGCGGGT CCGGGCCACG TGATCTACTC GGCGTTCGCC
GGCTACTACC TCGGACTGGC GAAGTTCAAC CGCGAACACG CCGGCCCGAT CGTCATCAAG
GGGCTCATCG TCGCGTCGCT GATCCACGCC ACCTACAACA CGCTGGTCGG CGTCGTCCCG
GCCGTCGTCT CGGTGCTCAC CGGCGTCTCG CCGCTGGTCG CCTTCCTCGG CTTCGTCCTC
GTCTACGACG GCGTGTTCGG CGCGTTGCTG CTGGGCAAGT TCAACGCCTA CGAACGGGCC
TACGAGCGGG CACACACCGA CGAGGTGCCC GCACCGGAAC TAACGGAGTT CGAACCCTGA
 
Protein sequence
MGNRRRDPVS VRDDGSQDLY DVSEWEVRSW LDRVAWLCYA ALVYSLRGFV VLAAIAILLS 
QFLVGGLGAL SNPVLGAFTV LSAVPALALA AYAWHTDVTT KEPLALLVAT FVLGVLFASF
AGIANSGLGP AVQGIGSGFL ASIVGTVLFY FLVVGPVEEG VKLLSVRLVA YRSDRFDAVI
DGAVYGAVAG LGFATIENAL YITQNADAGV TVANAVMEAG SITFLRSLAG PGHVIYSAFA
GYYLGLAKFN REHAGPIVIK GLIVASLIHA TYNTLVGVVP AVVSVLTGVS PLVAFLGFVL
VYDGVFGALL LGKFNAYERA YERAHTDEVP APELTEFEP