Gene Hmuk_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0537 
Symbol 
ID8410039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp508730 
End bp510064 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content66% 
IMG OID645018863 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003176378 
Protein GI257386605 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.128807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGAA CGATCCTCCG AACCGAGGGG CTCACGAAGT ACTACGAGAG CGACGAGGGC 
TTCGTCGACC GGCTGCTCGG CGAGCCACAG CTGGTCAGAG CCGTCGACGG AGTCGATATC
GAACTCGAAG CCGGCGAGAC GCTGGGTGTC GTCGGTGAGA GTGGCTGCGG GAAGACGACG
CTGGGCCGCT CGATACTCCA GCTCGTCGAG CCCACCGAGG GGTCGGTGTA CTACCACGAC
GGCCAACAGG AGATCGACCT CACCGAGGTC TCGAACTCGA AGCTGCGATC GCTGCGTACC
GACCTCCAGT ACATCTTTCA GGACCCGTTT TCGAGCCTGA ACCCGCGCCT GACCGTCGGA
GACATCATCG GCGAGCCCCT GGACATCCAC GACATCGCCA GCGGCGACGC TCGCATGGAG
CGGATCTACG AACTCCTCGA GACGGTCGGG CTCAACCCCA GTCACGCCAA CCGGTACCCC
CACGAGTTCT CGGGGGGTCA GCGCCAGCGG ATCGGCATCG CGCGCGCGCT GGCGGTCGAT
CCGGAGGTCA TCATCTGCGA CGAGCCCGTC TCGGCGCTGG ACGTGTCCGT CCAGGCCCAG
ATTCTGAACC TGCTCGAAGA CCTCCAGGAG GAGTTCGGGC TCTCCTACGT CTTCATCGCC
CACGACCTCA GCGTCGTCGA ACACATCTCG GATCGGATCG CGGTGATGTA CCTCGGCCAG
GTCGCCGAGG TCGGGCCGAC CGAGTCGGTG TTCAACCCCC CACACCACCC CTACACGGAA
GCGCTGCTGT CGGCGATTCC CGAACCGGAC CCGCTGTGGG AGGCAGACCA GACGCTGCTG
TCTGGCAGCG TCCCGTCGCC GATCGACCCG CCGAGCGGCT GTCGGTTCCA CACGCGGTGT
CCGCGGGTGA TCCAGCCCGA CGAGTACGAT CTCGACCAGT CCGTGTGGCG TGCCGTCATG
GACCTGAAGA TCAGGCTCTC CGGGACCGAC TCTCTGAAGT CTCTGACGGC GATCCCGGCC
GACGAGGACA CCGATCCTCA CGACGCTGGC CGGGACGAAC TGGACCGCCT CGTCCGCGAG
GAGTTCGGGC TCCCCGAGCA GGTCGGGGAC CCCCAGGTCG AGTCGGTGCT GTCCGATCTG
GTCGACGACC TGGCCCAGGC GGATCTGGAC GGCGCACGCA GCCGTGCTGC GGAGGCCTTC
GAGTCGCCCT GTGAACGACG GGACCCGCCG TTGACTCACA CCCGCGGTGG CCAGCAGATC
GCCTGTCTGC TGTACGAGGA CGACTATCCG GATCCACCGG CCGTCCTCCG TGACGGCGAG
CTCGCTGGCG ACTGA
 
Protein sequence
MSRTILRTEG LTKYYESDEG FVDRLLGEPQ LVRAVDGVDI ELEAGETLGV VGESGCGKTT 
LGRSILQLVE PTEGSVYYHD GQQEIDLTEV SNSKLRSLRT DLQYIFQDPF SSLNPRLTVG
DIIGEPLDIH DIASGDARME RIYELLETVG LNPSHANRYP HEFSGGQRQR IGIARALAVD
PEVIICDEPV SALDVSVQAQ ILNLLEDLQE EFGLSYVFIA HDLSVVEHIS DRIAVMYLGQ
VAEVGPTESV FNPPHHPYTE ALLSAIPEPD PLWEADQTLL SGSVPSPIDP PSGCRFHTRC
PRVIQPDEYD LDQSVWRAVM DLKIRLSGTD SLKSLTAIPA DEDTDPHDAG RDELDRLVRE
EFGLPEQVGD PQVESVLSDL VDDLAQADLD GARSRAAEAF ESPCERRDPP LTHTRGGQQI
ACLLYEDDYP DPPAVLRDGE LAGD