| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0513 |
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| Symbol | |
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| ID | 8410013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 483070 |
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| End bp | 485988 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645018837 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_003176354 |
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| Protein GI | 257386581 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAC AACAGACACC CAAATCGATC AGTTCCATTA GCTTCGGGCT GATGGATCCC
GAGGAGTACC GCGACATGAG CGCCACGAAG GTCATCACGG CCGACACCTA CGACGACGAC
GGGTTCCCGA TCGACATGGG ACTGATGGAC CCGCGTCTGG GCGTGATCGA CCCCGGCCTG
GAGTGTAAGA CCTGTGGCAA GCACAGTGGG TCGTGTAACG GCCACTTCGG CCACATCGAA
CTCGCAGCGC CCGTCATCCA CGTCGGGTTC AACAAGCTCA TCCGACGCCT GCTGCGCGGG
ACCTGTCGGG AGTGCTCGCG GCTCTGTCTC GACGAACGCG AACGCGAGGA GTTCGAGGAC
CGCCTCGAAC GATCCGAGGA GCTGGGCAAG GACGTCAACG ACGTGACCAA GGCCGCGATC
CGGCAGGCCC GCAAGAAGGA CCGCTGTCCG TTCTGTGGCG AGCCCCAGTA CGACATCAAA
CACGAGAAGC CGACGACCTA CTACGAGGTC CAGGACGTGC TCTCCTCGGA GTACTCCCAG
CGGATCGTCG CCGCGATGGA GCCCGACGAG GAGGCCGGCC GCGAACGGAC CACGCCCTCG
GAACTGGCCG ACGAGACGGG TATCGATCCC TCTCGCGTCC AGGAGATCAT CTCCGGAGAG
TTCCGACCCC GACAGGACGA CCGTCGGGCC ATCGAGTCGG CGCTGGACGT GGACCTCACC
GAGGAAGACG AGAACAAGCT GATGCCCAGC GACATCCGGG ACTGGTTCGA GGACATCCCG
GACGAGGACG TCGAGGTGCT GGGCATGAAG CCCGCCCGTT CTCGCCCCGA GTGGATGATT
CTCACCGTCC TGCCCGTGCC GCCGGTCACC GCGCGACCGT CGATCACGCT GGACAACGGC
CAGCGCTCGG AGGACGACCT GACCCACAAG CTGGTCGACA TCATCCGGAT CAACCAGCGG
TTCATGGAGA ACCGCGAGGC AGGCGCGCCC CAGCTGATCA TCGAGGACCT CTGGGAACTG
CTGCAGTACC ACGTCACCAC GTTCATGGAC AACGAGATCA GCGGCACGCC GCCGGCCCGA
CACCGCTCTG GCCGGCCGCT GAAGACCCTC TCTCAGCGCC TGAAAGGCAA GGAAGGTCGC
TTCCGTGGCT CGCTGTCCGG GAAGCGCGTG AACTTCTCGG CCCGGACGGT CATCTCCCCG
GACCCGACCC TGTCGCTCAA CGAGGTCGGC GTCCCCGACC GCGTGGCCAA GGAGATGACC
CAGACGATGA ACGTCAACGA GCGCAACCTC GACAACGCTC GTCGCTACGT CGCCAACGGG
CCCGAGGCCC ACCCCGGTGC CAACTACGTC AAGCGGCCCG ACGGTCGCCG ACTGAAGGTC
ACCGAGAAGA ACTGCGAGGA GTTGGCCGAG AAGGTCGAAC CGGGCTGGGA AGTGTCCCGT
CACATGATCG ACGGCGACAT CATCATCTTC AACCGCCAGC CGTCGCTGCA CCGGATGTCC
ATCATGGCCC ACGAGGTCGT GGTGATGCCC TACAAGACGT TCCGGCTCAA CACGACGGTC
TGTCCGCCGT ACAACGCGGA CTTCGACGGC GACGAGATGA ACATGCACGC CCTCCAGAAC
GAGGAGGCCC GTGCCGAGGC TCGCGTGCTG ATGCGCGTCC AGGAGCAGAT CCTCAGCCCG
CGCTTCGGTG AGAACATCAT CGGCGCGATT CAGGACCACA TCAGTGGGAC CTATCTGCTG
ACTCACACTA ATCCGGAGTT CAACGAGACC CAGGCACTGG ACCTGCTGCG TGCGACCCGG
ATCGACGAGC TCCCGCCCGA ATCCGGCGTC GACGACGACG GCACGCCCTA CTGGACGGGT
CGCGACATCT TCTCGGAGCT GTTGCCCGAC GACCTCGATC TGACGTTCAC CAGCGAGGCC
GGCGACGACG TGATCATCGA GGACGGGCAG CTCGTCGAGG GGACCATCGA CGACAGCGCG
GTCGGTGGGT TCGGCGGCGA GATCGTCGAC ACTATCACCA AGGAGTACTC CAACACCCGA
GCGCGCATCT TCATCAACGA GATCGCCGCG CTGGCGATGC GTTCGATCAT GCACTTCGGG
TTCTCGATCG GGATCGACGA CGAGTCCGTT CCCGAGGCCG CGGAGGCCCA GATCACCGAG
GCCATCGACA ACGCCTACGA CCGCGTCGAG GAACTCATCG AGACCTACGA TCGGGGCGAA
CTGGAGTCGC TGCCCGGTCG GACGGTCGAC GAGACCCTCG AAATGAAGAT CATGCAGACG
CTCGGCAAGG CCCGTGACTC CGCCGGTGAC ATCGCCGGAG ACCACTTCGA CGACGACAAC
CCGGCTGTCG TGATGGCCGA GTCCGGCGCG CGTGGGTCGA TGCTCAACCT GACCCAGATG
GCCGGCTGTG TCGGCCAGCA GGCGGTCCGT GGCGAGCGGA TCAACCGCGG CTACGAGGAC
CGCACCCTGT CACACTTCAA GCAGAACGAC CTCTCCTCGG ACGCCCACGG CTTCGTGGAG
GCGTCGTACC GCTCCGGACT CAACCCCAAG GAGTTCTTCT TCCACGCGAT GGGTGGCCGC
GAGGGGCTGG TCGACACGGC GGTCCGGACC TCCAAGTCCG GTTACCTCCA GCGCCGTCTG
ATCAACGCGC TCTCGGAACT GGAGGCCCAG TACGACGGCA CCGTCCGGGA CACCTCGGAC
AACATCGTCC AGTTCGAGTT CGGCGAAGAC GGCACCTCGC CGGTACAGGT CTCCTCGAAC
GAGGAGACGC CGGTCGACGT CGAGGAGATC GCGGACAGCG TTCTCGACGC CGAGTTCGAG
TCCGAGAGCA TCAAAAGCGA GTTCCTCGGT GAACGCACCG AGCCGACCAA TCTGTCGGAA
CACACCGACG ACTGGTGGAT GGCGGAGGGT GACGACTGA
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| Protein sequence | MSAQQTPKSI SSISFGLMDP EEYRDMSATK VITADTYDDD GFPIDMGLMD PRLGVIDPGL
ECKTCGKHSG SCNGHFGHIE LAAPVIHVGF NKLIRRLLRG TCRECSRLCL DEREREEFED
RLERSEELGK DVNDVTKAAI RQARKKDRCP FCGEPQYDIK HEKPTTYYEV QDVLSSEYSQ
RIVAAMEPDE EAGRERTTPS ELADETGIDP SRVQEIISGE FRPRQDDRRA IESALDVDLT
EEDENKLMPS DIRDWFEDIP DEDVEVLGMK PARSRPEWMI LTVLPVPPVT ARPSITLDNG
QRSEDDLTHK LVDIIRINQR FMENREAGAP QLIIEDLWEL LQYHVTTFMD NEISGTPPAR
HRSGRPLKTL SQRLKGKEGR FRGSLSGKRV NFSARTVISP DPTLSLNEVG VPDRVAKEMT
QTMNVNERNL DNARRYVANG PEAHPGANYV KRPDGRRLKV TEKNCEELAE KVEPGWEVSR
HMIDGDIIIF NRQPSLHRMS IMAHEVVVMP YKTFRLNTTV CPPYNADFDG DEMNMHALQN
EEARAEARVL MRVQEQILSP RFGENIIGAI QDHISGTYLL THTNPEFNET QALDLLRATR
IDELPPESGV DDDGTPYWTG RDIFSELLPD DLDLTFTSEA GDDVIIEDGQ LVEGTIDDSA
VGGFGGEIVD TITKEYSNTR ARIFINEIAA LAMRSIMHFG FSIGIDDESV PEAAEAQITE
AIDNAYDRVE ELIETYDRGE LESLPGRTVD ETLEMKIMQT LGKARDSAGD IAGDHFDDDN
PAVVMAESGA RGSMLNLTQM AGCVGQQAVR GERINRGYED RTLSHFKQND LSSDAHGFVE
ASYRSGLNPK EFFFHAMGGR EGLVDTAVRT SKSGYLQRRL INALSELEAQ YDGTVRDTSD
NIVQFEFGED GTSPVQVSSN EETPVDVEEI ADSVLDAEFE SESIKSEFLG ERTEPTNLSE
HTDDWWMAEG DD
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