Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0502 |
Symbol | |
ID | 8410002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 472328 |
End bp | 474187 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645018826 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003176343 |
Protein GI | 257386570 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00154856 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG GCGGGCTGTC CAGAGCGGTC GCGACGGCGC TGTCGGAGCT GCGGTTCGAC TACGCCCCGT CGCTGCAGAC CCAGCACCTC CTGCTGTTTG CCACGATGGC CCTCGTCACC GTCGGTCTGG CCTACTGGAT CACGCGAACC CGACAGACGA GGGGGGCCAA GCTATTCGGG CTCACCCTCG TCGTGCTCGG GGCCCGGCTG GCCTCGGACG TCGTCCACGG GCTCGTCGGC GAGCTCTGGC CGCTCCTGGA GGTGCTGGTC GCGCTGAACC CGCTCCTCGA ACTGGGGGTG CTGGTGCTGT TCGTGCGCTT TGCCGGCCGC TACGCCGGTG TCGAGCGAGT GGGGTCCGAC CGGGCGCGTC GTGCGATGGG CGGCCTCGTC GTCGTGGCGG CGATCGCGAT CGCGACCAAC CCGGTCCACG GACTGGTGTT CGACGCCGTC CGGCGGGTGT CGATCCCGTT CACCCACGTC GTCGTCGAGC GCGGCGTCCT CGGATTCGGC CTGCTGGGGG TGAACGTCGT CCTGTTGCTC GCCGCCGCCG GCCTGCTCGC GCACGCGGTG ACGACGGGGT TCCGGCCGGC GTGGTGGCCG GCGATCGTCC TCTCGATCGC GGTCTCGGTC GCGCTCGTGG TGATCGCCCT CCAGCTTCGC GTCGGCGGAG TGGTCCCCCA GTACGACTAC ACGGCGATCG GGTACGCCGG GTTCTTCTTC CTGACGACGC TGGCGCTGGT CGAGCACGGC CTGCGCCGCA TCGAGGTCGT CGCACGCGAG GAGATCCTCG ACGACATCGA CGACGCCGTC GTCCTGCTGG ACACCGACGG CACCGTCGTC ACGACGAACG CCGCCGCCGA GGGACTGTTC GGGACGCTCG ACGGAGCGGA GGGGTTCCTG GATCGGTTCG ACGAACTCGG GAGCGAACAG CTGGACGGCG ACCGAGAACG GACCGCGATC ACGATCGATC CCCAGACGAC CGAGTGGGAC ACGCTCCGGA ACACGACCGA GACCGCACAG CGGGGACCAC GGCACTTCCT CGTCTACACC GAGTACGTCA CCACGCGGAC GACGCGGGTC ATCGGCCACG TCGTCCGGTT CGTCGAGACG ACGGAACTCG AACGCCGCTC GCGGGAGCTC GAACGCAAGA ACGACCAGCT CGACCAGTTC GCCAGCACCG TCTCTCACGA CCTTCGGAAC CCACTGAACG TCGCGACGGG GTACCTCCAG ATGGCGACCG AGGGCGTCGA TCCCGACGAC GACGCGGCCT TCGACGTCGC GGCGGCGCTG ACCTACCTCG ACAAGGTCGA GGTGTCTCTC GACCGGATGG CGACGATCAT CGACGACATT CTGGCGCTGA TCGACAACAC CGACCCGGTG ACCGACACCG AGGCCGTCGA CTTCGAGTCG GTCGTCTCGG CCGCCTGGTC GACCGTCGAC ACCCGGTCGG CGACGCTCGA ACTGACCGGC GAGGGCACTG TCGATGCCGA CGAGACGCGA CTCCAGCGCC TGCTGGAGAA CCTGTTTCGC AACGCCATCG ACCACGTCGG CGACAACGTG ACCATCGAGG TGGGGCTGAC CGGCGAGGGG TTCTACGTGG CCGACGACGG CCCCGGCATC CCCGAGGACG AACGCGAGCG GATCTTCGAA CACGGCTACA CGACCGGCGA CGGGGGGACC GGGCTGGGCC TGTCGATCGT CCAGCAACTC GCCGAGGCCC ACGGCTGGAC GGTCTCGCTC GATCCCGACG CCGACGGCGC GGCGTTCGTC GTCGAGGGCT GTGCGACGAC ACGCCGTCCG GCACAGACGA CGGAGTCGAC CGAGCCCGAG CGGCGACACC GTTCCCGACG AGAGCGGTGA
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Protein sequence | MTDGGLSRAV ATALSELRFD YAPSLQTQHL LLFATMALVT VGLAYWITRT RQTRGAKLFG LTLVVLGARL ASDVVHGLVG ELWPLLEVLV ALNPLLELGV LVLFVRFAGR YAGVERVGSD RARRAMGGLV VVAAIAIATN PVHGLVFDAV RRVSIPFTHV VVERGVLGFG LLGVNVVLLL AAAGLLAHAV TTGFRPAWWP AIVLSIAVSV ALVVIALQLR VGGVVPQYDY TAIGYAGFFF LTTLALVEHG LRRIEVVARE EILDDIDDAV VLLDTDGTVV TTNAAAEGLF GTLDGAEGFL DRFDELGSEQ LDGDRERTAI TIDPQTTEWD TLRNTTETAQ RGPRHFLVYT EYVTTRTTRV IGHVVRFVET TELERRSREL ERKNDQLDQF ASTVSHDLRN PLNVATGYLQ MATEGVDPDD DAAFDVAAAL TYLDKVEVSL DRMATIIDDI LALIDNTDPV TDTEAVDFES VVSAAWSTVD TRSATLELTG EGTVDADETR LQRLLENLFR NAIDHVGDNV TIEVGLTGEG FYVADDGPGI PEDERERIFE HGYTTGDGGT GLGLSIVQQL AEAHGWTVSL DPDADGAAFV VEGCATTRRP AQTTESTEPE RRHRSRRER
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