Gene Hmuk_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0446 
Symbol 
ID8409945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp427168 
End bp428220 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content62% 
IMG OID645018769 
ProductAAA ATPase 
Protein accessionYP_003176287 
Protein GI257386514 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.399111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGG ACTCCGCTGT TTTCGAAGAC GAGCAGTTGC CGCGTCGCCT CCTCCATCGT 
GAAGCCGCCG TCGACCACCT GTCCCGTGCG TGGGAGCCGG CCCTCGATGG CGAGCAGGCC
CACGACGTAC TGATTCACGG CCCCTCCGGT GTCGGGAAAA CGTCGCTCGC CCGCTTCGCC
CTCCAGAAGC TCACCAGGCA CGCAGACATC CACTCGGCTC ACGTCGAGAG CCTCGGCAAG
AGCACGGCCG GCGTCGTTCG ATCGATCCTC CACGATCTCC CCGGCAGTGA CCCGGCGACG
AACACACCAC GCGAAGATCT GTGCATCGAG CTACGCGAGC GCGTCGACCA GCCGACGATC
GTCATCCTCG ACGAGGCCGA CGACTTGCCG GCCACCGACG CCCTGGACCG GCTGGCCGAC
GTAGACGGGC TGTCGGTCGT CGCGATCTGC CACGACAAAG AGCAGTGGCT CTCGCAGCTG
GACAATCAAC TCCGTCGACG ACTGTTGCTG AAAGAGCTGG CACTCGACCG CTTCGGCGTG
AACGAACTGG CGGACATCCT CGAAGCACGA GCGCGCCGTG GGCTACCGTC CGGTGTGGTC
ACGCGCGAGC AGTTGGAGGA GATCGCCGAC GAAGTGGCCG GCGTCGCTCG GAAGGGCATT
CAGTCGTTGC GGCAGGCGGC GCTGCTGGCC GAGGAACGGG ATCACAGCGA GATCGGGGCC
GACGATGTGG CGGATTCCTA CGAGCGGGCA CAGCGGTATA TTCTGGAGCA AAATCTGGAG
TCGCTACCGT TCCACCATCA GCTACTGTAC GAGCTGATTC GTGTGGGCAG TGGACTGAAA
GCTGGGGAGT TGCACGACCG CTACGAGGCG GTTGCGGAGG AGGTATATCA TGGGCGTGGG
CTGACGCCGA TCTCGGAACG GTCGAGGCGG CTGAAGCTCT CGAAGCTGGA GGATTACGAG
TTGATCGAAG TGGAAGGTGA GAATCGACAT CGTAAATATT CAGTCACTGA AACCGATATT
GAACTTTCAT TTAGCCTAAA TCTGATCGTC TGA
 
Protein sequence
MITDSAVFED EQLPRRLLHR EAAVDHLSRA WEPALDGEQA HDVLIHGPSG VGKTSLARFA 
LQKLTRHADI HSAHVESLGK STAGVVRSIL HDLPGSDPAT NTPREDLCIE LRERVDQPTI
VILDEADDLP ATDALDRLAD VDGLSVVAIC HDKEQWLSQL DNQLRRRLLL KELALDRFGV
NELADILEAR ARRGLPSGVV TREQLEEIAD EVAGVARKGI QSLRQAALLA EERDHSEIGA
DDVADSYERA QRYILEQNLE SLPFHHQLLY ELIRVGSGLK AGELHDRYEA VAEEVYHGRG
LTPISERSRR LKLSKLEDYE LIEVEGENRH RKYSVTETDI ELSFSLNLIV