Gene Hmuk_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0404 
Symbol 
ID8409902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp393144 
End bp394085 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content68% 
IMG OID645018726 
ProductAuxin Efflux Carrier 
Protein accessionYP_003176245 
Protein GI257386472 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.989352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.549528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCGC TGTGGGCGCT CGCGGCCGGC GTCGACCTCG ATCTGCTGGG GCGGTTCGCC 
TACATGCTCG CGCTGGTGGC CGTCGGCTTC GGCGCGCGCC GCCTCGGAGT GCTCACGAAC
GATCGTAACG AGCGACTCGG ACAGGTCGCC TTCTACGTTC TGTTGCCCGC GCTCGTCTTC
TCCTCGACCT ACGACAAGCG ACTGGGCGAG CTGGTCTCGG TCGCGCTCGT GGCGGGACTG
GTCGTCGTCA TCGGGACGCT GGTTGCCCTC TCGCTGGTGA GCAACCGCGG TGGCGACGAC
GACGTGCGCA GCGTGGCCGT GATCCAGTCG TACCACGGCA ACTTCGGGTA CTTCGGCGTG
CCCGTCGTGG CGGCGACGCT GGGCTCGACC GCGGCGGCGA CCGCGAGCAT CATCCTCGGA
CTGGGGGCAC TGATCCAGAT TCCACTGACG ATCCTCGTCC TCGTCCGGAT CAACGAGACC
GAGGCCGACT TCCTGGGGGA ACTCCGGAAC CTCGTGACGA ACCCGATCTT GCTGACACTC
GGCGTCGGTC TCGTCTTCGC GACGCTGCAA CTGGACGTAC CGACGGCCGC CGGGACCGGG
CTCGACTGGC TGTCGACGCT CGCGCTCCCG GTCGCGCTGC TCGCGGTCGG GGGCTCGCTC
GACCCGCGAG GTCCCGAGAT TCCGCTGACT CGGACCGCCA CGGTGGTCGG GCTGAAGGTG
CTGGTGATGC CACTGATCGC GTGGCTCGTG TTCTCCGGGC TCGGAGCCGA CGCGATGACG
CGCAACGCCG CGCTCGTCAT GTTCGGGGCT CCCACCGCCG TCTCCACGTA CGTCTACGCC
ACGGAACTGG GCGGTGACTC CGCGTTTGCC TCCGTCAACG TCTTCGCGAC GACGGTCGCC
TCGATCGTCT CGCTTTTCTT CCTGTTGCTG GTGATTACGT AG
 
Protein sequence
MDSLWALAAG VDLDLLGRFA YMLALVAVGF GARRLGVLTN DRNERLGQVA FYVLLPALVF 
SSTYDKRLGE LVSVALVAGL VVVIGTLVAL SLVSNRGGDD DVRSVAVIQS YHGNFGYFGV
PVVAATLGST AAATASIILG LGALIQIPLT ILVLVRINET EADFLGELRN LVTNPILLTL
GVGLVFATLQ LDVPTAAGTG LDWLSTLALP VALLAVGGSL DPRGPEIPLT RTATVVGLKV
LVMPLIAWLV FSGLGADAMT RNAALVMFGA PTAVSTYVYA TELGGDSAFA SVNVFATTVA
SIVSLFFLLL VIT