Gene Hmuk_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0400 
Symbol 
ID8409898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp389611 
End bp389862 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content64% 
IMG OID645018722 
ProductS1 IF1 family protein 
Protein accessionYP_003176241 
Protein GI257386468 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.146084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG ACGACGAGCT GTTCGCCGTA GTGACAGAGC ACAACGGCGG CAATCACGTA 
CGCGTGCAGT GCGAGGACGG CAAGGAGCGC ATGGGCCGGA TCCCCGGCCG CATGAAGTTC
CGGACGTGGA TCGAGACGGA CGACGTGGTG CTGGTGGAGC CGTGGGACTG GCAGGACGAG
AAGGCCAACA TCGAGTGGCG CTACACCAGT CAGGACGCCG ACCAGCTGCG GTCGGAAGGC
CACATTCAGT AA
 
Protein sequence
MPNDDELFAV VTEHNGGNHV RVQCEDGKER MGRIPGRMKF RTWIETDDVV LVEPWDWQDE 
KANIEWRYTS QDADQLRSEG HIQ