Gene Hmuk_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0396 
Symbol 
ID8409894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp385738 
End bp386925 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID645018719 
Productferrichrome-binding protein 
Protein accessionYP_003176238 
Protein GI257386465 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0579351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG AATCACGCCG ATCGCAGACA CGACGGACCG TGCTGAAGAC CGGGGCGACA 
CTGAGCGTGG CCGCACTCGC CGGCTGCACC GAGTCGACCA GCGGTGGAGA CGCTGACGAG
AGCGCATCGA CCACGACGGA CGCGCCGGCC GACGCCACGA CGACCACGGA CGCGGACGCC
GAGACGACCG CCGACACCAG CTACTCGGTC TCGATGGAGC CGGTCGGGAC CGTCGAGTTC
GACGAAGTGC CGGAGACCTG GGTCGCCAAC AACGGTAGCT GGGCCGACAT GGGGATCGCG
CTGGGCCAGC AGCCCCCCGA GGGCGTCTGG CTGCCCGGAC GCTACCACAC GCAGTACTAC
GACGACATTC CCGGCGTCAG CGTCGACACA GACGAGATGA CCGCGCTGTA TCAGGACAGC
GTCAGCAAAG AGCTGTTCTA CACGCTGGAT GGGGACGTAC ACGTCATCGA TCCCAACTTC
CTGCTAAATC GGTTCAAGGG CTGGGACCAG ATCGATATCG ACGAAGTCAC CGACAACGTC
GCGCCGTTCT TCGGCAACAG CATCTTCTCC GGGGGCTACA CCTGGCACGA GGACTACCAG
TACTACAGCC TGTACGAGGC CTTCGAGAAG CTCGCGGCCG TGTTCCAGCA GCGGGACCGC
TTCGAGGCAT TCAGCGCGCT CCACGACGAC TTTCAGTCCT CGATCGACGA CGTCGTCCCG
CCGGAGGGCG AACGGCCCGA AGTCGCCATT ATGTGGGCGG GCAGCGACGA ACCAACGGAG
TTCTCGCCGT ATCTCGTCAG TCGGGGAACG AGCTTCAAGC AGTGGCGCGA CCTCGGCGTC
CGCGACGCGC TGGCCGAAAC CGACGTGGAG GACTTCCACG AGAGCCGTGG CCGGATCGAC
TTCGAGACGC TGTTGAAGAT CGATCCCGAG CACATCATGT TCCGCGGCCA GGAAGCAAAG
AGCCGCGAGG CGTTCGAGGA CACCATCCTC GCCTACATGG AGAACCACGA GGTTGCCAGC
CAGCTCACTG CCGTCGAGAA CGGCGACGTG TACCGCGGTG GTCCGCTGTA CCAGGGTCCG
ATCACGAACC TCGTGCTCAC CGAGCGAGCG GCCCACCAGG TCTACGACAT CGACGAACAG
CTGTTCGACC GCCAGCGCGT CGCGGACATC GTCAACGGCG AGTTCTGA
 
Protein sequence
MTDESRRSQT RRTVLKTGAT LSVAALAGCT ESTSGGDADE SASTTTDAPA DATTTTDADA 
ETTADTSYSV SMEPVGTVEF DEVPETWVAN NGSWADMGIA LGQQPPEGVW LPGRYHTQYY
DDIPGVSVDT DEMTALYQDS VSKELFYTLD GDVHVIDPNF LLNRFKGWDQ IDIDEVTDNV
APFFGNSIFS GGYTWHEDYQ YYSLYEAFEK LAAVFQQRDR FEAFSALHDD FQSSIDDVVP
PEGERPEVAI MWAGSDEPTE FSPYLVSRGT SFKQWRDLGV RDALAETDVE DFHESRGRID
FETLLKIDPE HIMFRGQEAK SREAFEDTIL AYMENHEVAS QLTAVENGDV YRGGPLYQGP
ITNLVLTERA AHQVYDIDEQ LFDRQRVADI VNGEF