| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0395 |
|---|
| Symbol | |
|---|
| ID | 8409893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 384761 |
|---|
| End bp | 385696 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645018718 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003176237 |
|---|
| Protein GI | 257386464 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.423953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0324646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGA CCCACCCAAC CGACACGCCC ACCGAGGTGG GCCACCAGCG CAGTTGGCTC
ACCGGCCGTC TCGCGGCCTT CTGTCTCGCC AGCGCGGCGA TCACAGTGTT CGCGGGGCTG
CTACAGGTGA GCTTCGGCTC GTACTCGATG ACGATCGCCG AGGCCTGGCG CTCGGTGTTC
GACCCCTCGA TCGTCTTCGA CCCCGCCGTC TGGAACATCC GCCTGCCCCG CGTGCTCGTC
GCCGTCGTCA CCGGCGCGAC GCTTGACGTC TCGGGTGCCA TCTTTCAGGC GGTGGCCCGC
AACGAACTCG CCAGCCCCTA CATCCTGGGC GTCAGCTCCG GTGCGGGGCT GGCCGTCCTG
CTGACGCTGG TCGTGTTCAG CGGCCTCACA CCGTTCCTGC CGCTGATCGC GGCGGCCGGC
GGGACCGTGG CGTTCGCGCT CGTCTACGCG ATCGCCTGGA AAGGGGGGAC CAGCCCGGTC
CGGCTGGTAC TTGCCGGCGT CATCGTCGGC ACCGTCTTCC AGTCGCTCCA GACCGGCGTG
TTCTTCTTCG CGGACGACCT CGTGGTCGTC CAGTCGGCGA TCGCCTGGAC GACCGGCTCG
CTGACCGGCA CCGACTGGGA GCAGGTGCGG CTGTCGATCG TCCCGGCGAC GTTCGCGATC
GTGCTCGCGC AGGCCGCCCG CTTCGCCGAC AACCTCGTCG CGATGCGAGA CGGCCAGCTG
TACGACTGGG GCCCGCCCCG CGAGGTCGTC ACCGAGCAGC TCCTCGCAGA CGTGTTCGGC
GTCGAGGCCC GCATCCAGCA CGAACCGGAA CTCCAGATCC TCCCCAGCGG GCTCTCTCGG
AATGACCTAG CATCGATATT TCCGCGGCTT AATTTCTCAG ATCTGGGGAT TTATCCCCTG
AATCGCTCTC ATTCCGGCGT CGAACACACC AGTTAG
|
|---|
| Protein sequence | MAGTHPTDTP TEVGHQRSWL TGRLAAFCLA SAAITVFAGL LQVSFGSYSM TIAEAWRSVF
DPSIVFDPAV WNIRLPRVLV AVVTGATLDV SGAIFQAVAR NELASPYILG VSSGAGLAVL
LTLVVFSGLT PFLPLIAAAG GTVAFALVYA IAWKGGTSPV RLVLAGVIVG TVFQSLQTGV
FFFADDLVVV QSAIAWTTGS LTGTDWEQVR LSIVPATFAI VLAQAARFAD NLVAMRDGQL
YDWGPPREVV TEQLLADVFG VEARIQHEPE LQILPSGLSR NDLASIFPRL NFSDLGIYPL
NRSHSGVEHT S
|
|---|
| |