Gene Hmuk_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0388 
Symbol 
ID8409886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp380597 
End bp380974 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID645018711 
Productiron dependent repressor 
Protein accessionYP_003176230 
Protein GI257386457 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.180096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.327161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCG TCGCTCAGTA CCTGGTCGTC GTCTACGATC GAGAACGGAC CGACGGATCG 
CCGGTCGAGC CGGGCACCGT GGCACGGGCG ATGGGTCGCT CTCCGTCGGC GACCACGGAG
ATGCTCCAGC GCCTCGCGGA CGACGGACTC GTCGACTACG AACCGTACGA GGGCGTCACG
CTGACCGATC GCGGGCGCGA GCGAGCGACC GAGCTGTACG ACACCTACCG GACGCTGTCG
GCGTTCTTCG AGGAGGTGCT CGAACTGGAG TCGCCAGAGC GAGAGGCCCG CGCGGTCGTC
GACACGGTCA GTCCCATCGT CGCCGACCGG CTCGACGCCC TCCTGCTGGA GGGCGAGGAG
AGCGTCCCGG TCCAGTGA
 
Protein sequence
MERVAQYLVV VYDRERTDGS PVEPGTVARA MGRSPSATTE MLQRLADDGL VDYEPYEGVT 
LTDRGRERAT ELYDTYRTLS AFFEEVLELE SPEREARAVV DTVSPIVADR LDALLLEGEE
SVPVQ