Gene Hmuk_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0386 
Symbol 
ID8409884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp379754 
End bp380269 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content70% 
IMG OID645018709 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003176228 
Protein GI257386455 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.166623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.344702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC GGTTCCGCGT GACGGTCGAG CACGACGACG AGACCGAGAC GGCGCTGTTC 
TCGGACGGCG AGTGTGCTCT CTCGGCCGGC GATGCCACCG TCCGATTCAA CCTCGGTGAG
AGCGCGTCAG ACGACGGCCC GGTGGCCGGA GACGACCCCA AGCGGATCGT CGACCTCGAC
GCGGTCCCGA CGGACTCGAC CGTTCGGTTC GAGGCCCGCG GCCCGTCCCA CGGCGTCGAC
TGCATCTTGC GGCGAATCGA CGACGCGGTC GTCGCCTGGC GCAACTCCTG TCCCCACCGA
CCGGAGGTCC CGCTCGATCC GGGGACCGGC GCGATCGTCC GCGGCGACGA CCTCGTCTGT
CACAAACACG GCGCACAGTT CTCCGGCGGC GAAGGGACGT GTACGCACGG TCCCTGTGCC
GGCGACGCGC TCGACGCGGT CGCCGTCGCG GTCGACGACG ACGCGGTCTA CCTGACCGAC
GATCGGTTCG AGTCGGCCCG CGTGCTCGGT CAGTAG
 
Protein sequence
MSDRFRVTVE HDDETETALF SDGECALSAG DATVRFNLGE SASDDGPVAG DDPKRIVDLD 
AVPTDSTVRF EARGPSHGVD CILRRIDDAV VAWRNSCPHR PEVPLDPGTG AIVRGDDLVC
HKHGAQFSGG EGTCTHGPCA GDALDAVAVA VDDDAVYLTD DRFESARVLG Q