Gene Hmuk_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0385 
Symbol 
ID8409883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp378318 
End bp379760 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content72% 
IMG OID645018708 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003176227 
Protein GI257386454 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0738628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.436198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC CGTTCGTCGC GATCGGTGGC GACGCGGCCG GCCTGAGCGC CGCCAGCAAG 
TGCAAGCGCG AGCAGCCAGA GCGGGACGTG ATCGTCTTCG AGAAGGGGTC GTGGGTGTCC
TATTCGCACT GCGGGATGCC ATACTTCGTG AAGGGAGAGG TCGACCGGCT GGACGATCTA
CTGTCGCTGT CGCCAGCGGA GATCCGGGAG CGGGGGATCG ACCTTCGCCG GGGGCACGAG
GTCGTGGCGA TCGACAGCGA CGCACGCGTC CTCACCGTCG AGACGAGCGC GGGCGACCGT
CTCGAACAGC CCTACGGCGA CCTCCTGATC GGGACCGGCG CGCGTGCGGT CACGACGCCG
ATCGAGGGGA GCGACCTCGC GGGGGTTCAC ACGATGCACG GGCTGGACTC GGCCGCGGCC
GTCCGCGCTC ACCTGCTCGA TCCGGCGGTC GACGCCGTCG CAGACGTGGG CGGCGAGGAG
TTCGTCGACC GCGAGCTGGT CGAGCGCCAC GCCGCGTTCG AGCCGCCAGA GACCGTGGCG
ATCGTCGGCG GCGGCTACGT CGGCGTCGAG ATGGCGGAGG CGTTCAGCGC CCACGGGCTG
GACGTTCACC TCTTCCAGCG TGGCGAGCAC GTCCTTCCGC CCTTCGGCGA AGCGGTCGCC
GAGGTCGTCG AGGGGGAGCT CGCCGCCGAG GGCGTCACGC TCCACCTCGG CGAGGAGGTC
CAGCGCCTCG ACGGCGACGA CGGCCGAGTC GAGCGCCTCG TCTGCGCCGG CGGCGCGTCG
CTGGCGGTCG ATCTGGCGCT CGTGGGCATC GGGATCCGTC CCAACACGGA CCTCCTCGCG
GACACGCCGA TCGAGACCGG CGTCGCCGAC GCCGTCGCGG TCGACGACTA CGGCCGGACG
AACGTCGACG GCGTCTACGC GGCGGGCGAC TGTGCGACGA TGCGCCACGC GGTCACCGGC
GAGCGCGACT GGGTGCCGCT CGGCCTGACC GCGAATCGGG CGGGGCGAGC GATCGGCGCG
ACCGTCGCTG GCGACCCGAC GCCCGTGGGC GACATCGCGG GGACCGCCGT CGTCAAGGCC
TTCGAGCAGG AGTGTGGCCG GACCGGCCTC GTCGATCACG AGGCGGCCAG CGACGCCGGC
TTCGATCCGG TCAGCGAGAC GATCACCGCC GGCTCGCGGT CGGGCTACTA CCCCGGCGGG
GCCGAGACGA CGGTGACGCT GATCGCCGAC CGGGACAGCG GCCGTCTGCT GGGCGGGACT
ATCGTCGGCA CCGATCGCGC GGCGATCCGG ATCGACATCG TCGCGATGGC GCTGGAACAG
GACGCGACTG TGGGAGAGCT AGAGCGGTCC GACCTGGCCT ACGCGCCGCC GTTCTCGCCC
GTCTGGGACC CCGTCCTGAC GGCCGCGAAG GTGCTCGGCT CGTCGGTCCA AGAGCGCTAC
TGA
 
Protein sequence
MTDPFVAIGG DAAGLSAASK CKREQPERDV IVFEKGSWVS YSHCGMPYFV KGEVDRLDDL 
LSLSPAEIRE RGIDLRRGHE VVAIDSDARV LTVETSAGDR LEQPYGDLLI GTGARAVTTP
IEGSDLAGVH TMHGLDSAAA VRAHLLDPAV DAVADVGGEE FVDRELVERH AAFEPPETVA
IVGGGYVGVE MAEAFSAHGL DVHLFQRGEH VLPPFGEAVA EVVEGELAAE GVTLHLGEEV
QRLDGDDGRV ERLVCAGGAS LAVDLALVGI GIRPNTDLLA DTPIETGVAD AVAVDDYGRT
NVDGVYAAGD CATMRHAVTG ERDWVPLGLT ANRAGRAIGA TVAGDPTPVG DIAGTAVVKA
FEQECGRTGL VDHEAASDAG FDPVSETITA GSRSGYYPGG AETTVTLIAD RDSGRLLGGT
IVGTDRAAIR IDIVAMALEQ DATVGELERS DLAYAPPFSP VWDPVLTAAK VLGSSVQERY