Gene Hmuk_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0376 
Symbol 
ID8409874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp369256 
End bp371385 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content70% 
IMG OID645018701 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_003176220 
Protein GI257386447 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.13305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.32452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG GGACAGACAC CGAGATTCGA CGGCTCGATT CGGCGACCGT CGAGCGCATC 
GCGGCGGGGG AGGTCGTCGA GCGGCCCGCA AGCGTCGTCA AGGAACTCGT CGAGAACGCG
CTGGACGCCG ACGCCGACCG CGTCAGCGTC GCCGTCGAGC AGGGCGGTAT CGAGGGGATC
AAGGTGACCG ACGACGGGAT CGGGATGAGT CGCGAGGCCG TCGAGCGGGC CGTCGAGGAG
CACACGACGA GCAAGATCAG TTCGATCGAG GACCTGGAGC GCGGGGTCGG GACGCTCGGC
TTCCGTGGCG AGGCCCTGCA CGCGATCGGG GCAGTCTCTC GGACGACGAT CACCACGCGC
CCGCGAGGAA GGGAGCACCA GGGGACCGAA CTCGTCGTCG AGGGCGGCGA CGTGACCGCC
GTCGAGCCGG CGGGCTGTCC CGCCGGGACG ACCATCGAAG TCGACGATCT CTTCTACAAC
GTCCCGGCTC GCCGGAAGTA CCTCAAGCAG ACGAGCACGG AGTTCGCCCA CGTCAACACC
GTCGTCACCA GCTACGCGCT CGCGAACCCC GACGTAGCGG TGACGCTGTC ACACGACGGC
CGGGAGACGT TCGCGACGAC GGGACAGGGC GATCTCGAAG CGACCGTCCT CTCGGTGTAC
GGCCGCGACG TCGCACAGTC GATGATCGAG GTGGACGACG GCGATCTGCC GGACGGACCC
CTGGAGTCGG TGACCGGACT CGTGAGCCAC CCCGAGACCA ACCGCGCGAG CCGGGACTAC
CTCTCGACGT ACGTCAACGG CCGCTACGTC CGGGCCGACG CGGTGCGGGA GGCGATCGTC
GACGCCTACG ACACTCAGCT CGCGCCCGAT CGGTACCCCT TCGCGGTCCT CTTTTGTGCC
GTCGATCCGG CGACCGTCGA CGTGAACGTC CACCCCCGCA AGATGGAGGT CCGTTTCGCA
GACGACGAGG GCGTCCGTCG ACAGGTCGAG CACGCGGTCC AGTCGGCGCT GCTCTCAGAA
GGGCTCGTCC GCTCCAGCGC ACCGCGGGGC CGCTCGGCCG CCGAGCAGAC CGAGATCGCG
CCCGAATCCG GGCGGGTGGA CGACGAGACA GACGCCACCG GGGCCCGCGA GGAGGCCGAC
GGGGAGCAGT CCGACGGCGA CTCAGCTGGC GAGGCGCGTC GTCGTGACAC CCCGGTTTCG
GATCGAGCCG CCGACGGAGC GAGTGGCGCA TCCGCCGGCG AACGTGGCGA CCGCGGACAG
CCCGACGCGA CGACGGGGAT CGACGTGACG GACGACGATG CGACGGCCGA CAGCGCGGCG
GACACCACCT CGCCGCGGAG TCGGTCGAGC GCGTCCAGCG GACGAGACGA GCCACCGACG
AGCGCGCAGT CGACCCGGAC GGACGACGCC GACCGCGGTC GTGCCCGCAC CGGGCGCGAC
GCGGACCCAG AGCGGAAGTT CCGCGGCGAC GACCGCCAGG CCCGGCTGGG CGGCGAGGAA
CCGGGCCAGT CGCTCGACTC GCTGCCGGCT CTGCGAATCC TCGGGCAGCT CCACGAGACC
TACGTCGTCG CGGAGGCCGA CGACGGACTG GTCGTGATCG ACCAGCACGC GGCCGACGAG
CGGATCAACT ACGAACGCCT GAAAGATGCC TTCGAAGGCG AGACGACGAC GCAGGCGCTG
GCCGAACCGG TCGAACTCGA ACTGACGGCG GGGGAGGCCG CGGTGTTCGA AGACCGCGTC
GAGGCGCTCG CGCGACTGGG GTTTCACGCC GACCGAACCG GTGACCGGAC CGTCGAGGTG
CGGACGGTCC CCGGCGTAAT CGCCGACGCC GCCGGCCCCG AACTCGTCCA GGACGTGCTG
GCGGCGTTCG TCGCGGGCGA GCACGAGGCC GCCGACACGG TGGAGGCCGC CGCCGACGAG
CTGCTTGCGG ATCTCGCCTG TTACCCCTCG ATCACGGGCA ACACCTCGCT GACCGAGGGC
TCGATCCGGG AGTTGCTCGC CGCGCTCGAC GACTGTGAGA ACCCCTACGC CTGTCCGCAC
GGTCGACCGG TCGTCGTCGA GATCGATCGC GGCGAACTCG AAGACCGGTT CGAACGGGAC
TATCCGGGCC ACAGCGGCCG GCGGACCTAA
 
Protein sequence
MSEGTDTEIR RLDSATVERI AAGEVVERPA SVVKELVENA LDADADRVSV AVEQGGIEGI 
KVTDDGIGMS REAVERAVEE HTTSKISSIE DLERGVGTLG FRGEALHAIG AVSRTTITTR
PRGREHQGTE LVVEGGDVTA VEPAGCPAGT TIEVDDLFYN VPARRKYLKQ TSTEFAHVNT
VVTSYALANP DVAVTLSHDG RETFATTGQG DLEATVLSVY GRDVAQSMIE VDDGDLPDGP
LESVTGLVSH PETNRASRDY LSTYVNGRYV RADAVREAIV DAYDTQLAPD RYPFAVLFCA
VDPATVDVNV HPRKMEVRFA DDEGVRRQVE HAVQSALLSE GLVRSSAPRG RSAAEQTEIA
PESGRVDDET DATGAREEAD GEQSDGDSAG EARRRDTPVS DRAADGASGA SAGERGDRGQ
PDATTGIDVT DDDATADSAA DTTSPRSRSS ASSGRDEPPT SAQSTRTDDA DRGRARTGRD
ADPERKFRGD DRQARLGGEE PGQSLDSLPA LRILGQLHET YVVAEADDGL VVIDQHAADE
RINYERLKDA FEGETTTQAL AEPVELELTA GEAAVFEDRV EALARLGFHA DRTGDRTVEV
RTVPGVIADA AGPELVQDVL AAFVAGEHEA ADTVEAAADE LLADLACYPS ITGNTSLTEG
SIRELLAALD DCENPYACPH GRPVVVEIDR GELEDRFERD YPGHSGRRT