Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0355 |
Symbol | |
ID | 8409853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 346637 |
End bp | 348259 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645018680 |
Product | phosphate ABC transporter, inner membrane subunit PstA |
Protein accession | YP_003176199 |
Protein GI | 257386426 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0581] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00446882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.408906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC AAGACGAGGG CGTCGACCAA CTGCGTCAAG CGAGCGGCAC CCGGCTTCGA GAGCTCAAAG GCCAGCTCTT CGAGGCGGCG CTGCTGGGCG CGACGCTCGT CGGTATCGTG TCGTTACTGA TCCTGTTCGG GTACATCGCG TTCGACACGT TTCAGCCCCT GACGGCCTCG GCCCAGTGGT ATCTCCTGTA CTTCGGGACG CTGGTGGCCC CGACCGCCGC GTTCACGTGG TACGCGAGAC GGGACACGGC CGTCCGAGCC GTGAACGCGA AGGCCTTCGC CGTCGTGTTC GGCGGGCTGG CTGTCAGCCT CGTCACTTAC GTCGTCGCGG ACTCCGTGAG TCCGTACGAC GTGCTCATCT ACCTGCTGTT CGGAGCTATC CCTCCGCTGC TGGTCGGTGT GTACGGTCGC ACGACGGACG AGCGGACGTA CACCGGTCCC GCGATACCGG TGGCGGCCGT GCTCGGCCTC GGTGTCGCTG CGCTGCTCTA CGGCCTCGTT CGCCCGGTCG TCGGTATCGC GGCCCAGTGG ATCGCGTATT TCGGAATCAC GACGCTTCCG GTCGCCGGCA TCATCGGTTT CGTCGTGGCG CGTCGCTGGT CGCCCCGGCA TGGTATAATG GCCACAGCGG CCGTCCTTCT GAGTGCGTTC CTGGTCGCTG GCGGGCTACT CGGTGTCGGT ACCGATCCGT CGTTCTGGGT CGTGCTCTTT TCGACGTTCG TGGTCCCGGT GGGGTACGTC GTCGGCTCGA CGGTCGGCAC GAACTCGGAG GGTCGAATCG GCGTCCTCGG ACCGTTCGTG CTCATCGGCG GCGTGCTCGC GGGTGCCACG CTCGAACGAC AGCTCGCCAT CAAGGGTCTG GAGAGCTATC TGACGCCGAC GCTGCTCTTG GAGTCGTGGC ACGGGCGGGT TGCGAGTGAG GCCGGCGTCT ATCCCCAGCT CGTCGGGTCG ATCGTCGTCG TCGGGTTCAT GGCGATCCTC GCCTTTCCGG TCGGAATCAG TGCGGCCGTC TACCTCGAAG AGTACGCCCC GAAATCGGGC TGGGGCAGTC GGTTCGCGAC GCTGCTCGAA GTGAACATCT CGAACCTCGC GGGCGTTCCG TCAGTCGTCT ACGGCCTGTT GGGGCTCGCC CTGTTCCGGC GGACGCTTGG GTTCGGAACC GGGATCGTCG TCTCCGCCGC GGGGACACTC GGGCTCCTCA TTCTCCCGAT CGTGGTCGTC TCGGCACAGG AGGCGATCCG GGCCGTTCCC GACTCGCTCC GGGAGGCCTC GTACGGCATG GGGGCAAGCC GCTGGCAGAC GCTTCGCAAC GTGGTGTTCC CCGAAGCGGT TCCGAGCATA CTCACCGGGA CGATTCTGGC GCTGGCTCGT GCGATCGGCG AGACCGCGCC ACTCGTCATG ATCGCGGTGG CGACGACGAC GTACACGCCG CCTGAGGGGC TGTTCTCGTC GGCGACCGCG CTGCCGCTCC AGATTTACGC TGCGAGGTCC AGCGCGTTGC CGGAGTTCAG ACACGGCGTG GTGCCGGCGG CCGCCATCGT GTTGCTGGCC CTGATGCTGG TGATGAACGC GACGGCTGTC ATCGTCCGGA ATCGATACGA GCGAGACACC TGA
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Protein sequence | MATQDEGVDQ LRQASGTRLR ELKGQLFEAA LLGATLVGIV SLLILFGYIA FDTFQPLTAS AQWYLLYFGT LVAPTAAFTW YARRDTAVRA VNAKAFAVVF GGLAVSLVTY VVADSVSPYD VLIYLLFGAI PPLLVGVYGR TTDERTYTGP AIPVAAVLGL GVAALLYGLV RPVVGIAAQW IAYFGITTLP VAGIIGFVVA RRWSPRHGIM ATAAVLLSAF LVAGGLLGVG TDPSFWVVLF STFVVPVGYV VGSTVGTNSE GRIGVLGPFV LIGGVLAGAT LERQLAIKGL ESYLTPTLLL ESWHGRVASE AGVYPQLVGS IVVVGFMAIL AFPVGISAAV YLEEYAPKSG WGSRFATLLE VNISNLAGVP SVVYGLLGLA LFRRTLGFGT GIVVSAAGTL GLLILPIVVV SAQEAIRAVP DSLREASYGM GASRWQTLRN VVFPEAVPSI LTGTILALAR AIGETAPLVM IAVATTTYTP PEGLFSSATA LPLQIYAARS SALPEFRHGV VPAAAIVLLA LMLVMNATAV IVRNRYERDT
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