Gene Hmuk_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0351 
Symbol 
ID8409849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp342141 
End bp344057 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content71% 
IMG OID645018676 
Productcopper-binding protein 
Protein accessionYP_003176195 
Protein GI257386422 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.278001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCT CTGAGGCGAC TGGCTGGCAA TGGTTCGCGA TCGCCCTCGT CGCGGTCGCC 
GCCGTCGTCG TGACCGCTGC GTTTACCGCC GACGCCGGCA GTGCCCGCCC CGAGCCGGTC
GCGTACGACG AGACGGTTGG CGTCGGCCTC ACGATGGAAG CCGAACAGAT CGCGCGTGCG
GAGGGGGCCT CTGTCCCCCG TGCGGAGGTC TTCTACTCGC AGTTCCGGTA CGTGGTCGGC
TACCCCGGCA TCGACCGGCT GGTGAGTGCG CTGGACGCGC CAGCCCGCGC CAGTCAGTTC
GGCTTCCCAC TCGCGGTGTA CGTCTCCGAC TACGGCGGCG TCTCGGTGGA CTGCTCGGCC
GGCGGCTCGC TCTCGGCGTC GGCCACCCCA GAGTGGACGC CGGCCGAAAC CGCCCACTAC
GTCGTCGACA GCGACGCACG CAGCCCTGCC GGGCCGGTGA TCGTCCCCTT CGAGGACCGC
GCGGACGCCG AGGCCTTCAC CGGGGACTGT GGCGGCCGAG TCGTCGACTG GCAGACGGTC
CGCGCTCGGG AGCCGACGAC AGACGACCCC GCCGCGGCGG TCCGAGCACA GGTCGAGCAG
CGAGCGTCGC GAGCCGACGA GCGGGTCGGG GCCGCCCGCG AGCGCCGCGA TCGTCCGGTC
TCGGTCGTCG TCGGCCGCGA CGTGGCGACG GTACGGGCCG CGATCGACCG CGCGCCGCCG
AACACGACGA TCAGGGTCCC GACGGCGACC ACCGTCGGCA ACGTCACCGT CGACAAACCG
GTGACGCTGC GGGGCGAGGG CACCCGACTC GACGGCGGCG GCGACGGGAC GGTCCTCCGG
GTGACCGCCG ATCGGGTCGG CGTCGTCGGC TTCGAGATCG TCGGCGTCGG GAACGCGACC
GTCGGCGAAC CGACGAACGC CGACTCGTCC TGGGACGCAC CGGTCCGCCG GGGATACGGG
CAGAGCGACG CCGCCGTCGC GGCGACGAAC GTCTCCGGGC TCTTCGTCGC GAACGTCTCC
GTCGAGACGC CGGCCAGCGG GTTCGTCCTC GTCGGGACGC CCGGCGCGGT CGTCGAGAAC
GTCACCGTCG ACGGGACCGA CGACTGGCGC GACGGATTCA TGGGCGTCGT CGGAATGGAC
GAGCCGATCG TCGTCCAGCA CTCGACGTTT ACCGACGGGC GCGACGGCGT CTACTTACAC
CGGGCCGACG GGACCGTGCT CCGGAACAAC ACGTTCCGAG GCAACCGCTT CGGTACGCAT
CTGATGTACA CCTCCGACGC ACTGATCGCC GACAATCAGG TGCGCGACCA GAGCCACGCG
GGGATCGTCG TCATGACGGA CCCCTCGGGC AACGCGATCG TCGGCAACGA CGTTCGCCGT
GCCAGGAGCG GCATCCTCAC CGCGGGTTCG AGGAGCTACG TCGGCCACAA CGTCGTCGTC
GGCACCGAGC GCGGGCTCTC GACGAACGCC GGTCGGTCCC TGTACGAGCA CAACGTCCTC
TCCGACAACG CGGTCGGCGT GACGGCGGCG ACGATCGTCC CGTCGAACCG GGTCGTCGAG
AACGACTTCG TCGCCAACGA TCGCCACGCC ACGAGCAGGC CCGGACCCAT GCGCATCTAC
ACGCACGACG GTCGTGGGAA CTACTGGAGC GGCGCGTACG ACCTCGACGA GGGCGGTCAG
GCGCTGTCAC GTCCCTACTC GCCGACGGAC TCGGTCGATC GACGGCTCCA CCGGAGCGAC
GCCGCGGTGG TGCTGAGCGA GGCACCCAGC GTCCACGCGC TTCGGTCTCT CCGGGGGACG
ACACCCGGAT TCAGGTCGGC CAGTATCGTC GACACGGCTC CCCTGACCGA GCCGGCCAAC
CCGAGACTCC TGGCGACGGC GACTAACGAG ACGACCGACG GGGGTGTCTC GCCGTGA
 
Protein sequence
MITSEATGWQ WFAIALVAVA AVVVTAAFTA DAGSARPEPV AYDETVGVGL TMEAEQIARA 
EGASVPRAEV FYSQFRYVVG YPGIDRLVSA LDAPARASQF GFPLAVYVSD YGGVSVDCSA
GGSLSASATP EWTPAETAHY VVDSDARSPA GPVIVPFEDR ADAEAFTGDC GGRVVDWQTV
RAREPTTDDP AAAVRAQVEQ RASRADERVG AARERRDRPV SVVVGRDVAT VRAAIDRAPP
NTTIRVPTAT TVGNVTVDKP VTLRGEGTRL DGGGDGTVLR VTADRVGVVG FEIVGVGNAT
VGEPTNADSS WDAPVRRGYG QSDAAVAATN VSGLFVANVS VETPASGFVL VGTPGAVVEN
VTVDGTDDWR DGFMGVVGMD EPIVVQHSTF TDGRDGVYLH RADGTVLRNN TFRGNRFGTH
LMYTSDALIA DNQVRDQSHA GIVVMTDPSG NAIVGNDVRR ARSGILTAGS RSYVGHNVVV
GTERGLSTNA GRSLYEHNVL SDNAVGVTAA TIVPSNRVVE NDFVANDRHA TSRPGPMRIY
THDGRGNYWS GAYDLDEGGQ ALSRPYSPTD SVDRRLHRSD AAVVLSEAPS VHALRSLRGT
TPGFRSASIV DTAPLTEPAN PRLLATATNE TTDGGVSP