Gene Hmuk_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0339 
Symbol 
ID8409837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp334574 
End bp334768 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content57% 
IMG OID645018664 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_003176183 
Protein GI257386410 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.219193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG GTACGGTTGA TTTCTTCAAC GACACAGGCG GCTACGGATT CATCGAGACT 
GAGGACGCGG ACGACGACGT TTTCTTCCAC ATGGAAGACG TGGGCGGCCC TGACCTCGAA
GAAGGTACTG ACGTCGAATT CGACATCGAA CAGGCCGACA AAGGCCCCCG CGCGACCAAC
GTCGTCCGCC AGTAA
 
Protein sequence
MANGTVDFFN DTGGYGFIET EDADDDVFFH MEDVGGPDLE EGTDVEFDIE QADKGPRATN 
VVRQ