Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0330 |
Symbol | |
ID | 8409828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 324244 |
End bp | 325119 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645018655 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003176174 |
Protein GI | 257386401 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.86109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA CAACGGAAAC AGACTCAACG CCCGTCGACG AATCACGGAC GATCAGCCAG CGACTGCCCG ACAACCTGGC GATGCACGTC GGGATCATCC TCTCGATCGT CGCGATGGCG GCCCCGCTCT TGCTCGCGAT CATCATGAGC ACGCAGACGA CCTCCGAGGT CTACGAGGTG ACGAACCTCG GCCTGGGGAG TCAGGGGCTG TCGAACTACC AGACGGTCCT CTCTGAGTAC CAGTTCACCA CGTACCTGCT CAACTCGTTC GTGATGAGCA TCATCATCGT CGTCGGCAAG GTCGGTATCT CGCTGCTGGC GGCGCTGGCG CTGGTCTACT ACGAACTCCC CTACGAACGT GCGGTGTTCA TGTTCATCCT CCTGACGCTG CTGTTGCCGG TACCGGTCCG TATCGTCCCG CTGTTCCAGC TGATGGCGGA CCTGGGGTGG ACGAACACGA TGCTCGCACT GACGGGTCCG TACATCGCCA GTGCGACCGC CGTGTTCCTG TTCCGCCAGC ACTTCATGTC GATCCCGAGT TCGCTGGTCG AGACGGCCCG GATGTCCGGA ATTGGACCGG CCACATTCCT GTTCAAGGTC CTGATCCCGA TGTCGAAGGG GATGATCGCC GGCGTCTGTG TCATCACCTA CATCTACTCG TGGAACCAGT TCCTCTGGCC CCTCGTCGCG GTCAACGACA AGAGTTCGCA GGTGGTGCAG GTCGGGATCA GCTACCTTCA GGGGTCGGCA CAGGCCGGAC TGACGCCCTG GGGCCTGATC ATGGCGGGTG CCTGTATCGC CCTGCTGCCG CCACTGCTCG TCTTGATTGT GCTTCACCGG CCGCTCCTGC AGACGTTCGC TGTCCAACGG AAGTGA
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Protein sequence | MATTTETDST PVDESRTISQ RLPDNLAMHV GIILSIVAMA APLLLAIIMS TQTTSEVYEV TNLGLGSQGL SNYQTVLSEY QFTTYLLNSF VMSIIIVVGK VGISLLAALA LVYYELPYER AVFMFILLTL LLPVPVRIVP LFQLMADLGW TNTMLALTGP YIASATAVFL FRQHFMSIPS SLVETARMSG IGPATFLFKV LIPMSKGMIA GVCVITYIYS WNQFLWPLVA VNDKSSQVVQ VGISYLQGSA QAGLTPWGLI MAGACIALLP PLLVLIVLHR PLLQTFAVQR K
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