Gene Hmuk_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0330 
Symbol 
ID8409828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp324244 
End bp325119 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID645018655 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003176174 
Protein GI257386401 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.86109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA CAACGGAAAC AGACTCAACG CCCGTCGACG AATCACGGAC GATCAGCCAG 
CGACTGCCCG ACAACCTGGC GATGCACGTC GGGATCATCC TCTCGATCGT CGCGATGGCG
GCCCCGCTCT TGCTCGCGAT CATCATGAGC ACGCAGACGA CCTCCGAGGT CTACGAGGTG
ACGAACCTCG GCCTGGGGAG TCAGGGGCTG TCGAACTACC AGACGGTCCT CTCTGAGTAC
CAGTTCACCA CGTACCTGCT CAACTCGTTC GTGATGAGCA TCATCATCGT CGTCGGCAAG
GTCGGTATCT CGCTGCTGGC GGCGCTGGCG CTGGTCTACT ACGAACTCCC CTACGAACGT
GCGGTGTTCA TGTTCATCCT CCTGACGCTG CTGTTGCCGG TACCGGTCCG TATCGTCCCG
CTGTTCCAGC TGATGGCGGA CCTGGGGTGG ACGAACACGA TGCTCGCACT GACGGGTCCG
TACATCGCCA GTGCGACCGC CGTGTTCCTG TTCCGCCAGC ACTTCATGTC GATCCCGAGT
TCGCTGGTCG AGACGGCCCG GATGTCCGGA ATTGGACCGG CCACATTCCT GTTCAAGGTC
CTGATCCCGA TGTCGAAGGG GATGATCGCC GGCGTCTGTG TCATCACCTA CATCTACTCG
TGGAACCAGT TCCTCTGGCC CCTCGTCGCG GTCAACGACA AGAGTTCGCA GGTGGTGCAG
GTCGGGATCA GCTACCTTCA GGGGTCGGCA CAGGCCGGAC TGACGCCCTG GGGCCTGATC
ATGGCGGGTG CCTGTATCGC CCTGCTGCCG CCACTGCTCG TCTTGATTGT GCTTCACCGG
CCGCTCCTGC AGACGTTCGC TGTCCAACGG AAGTGA
 
Protein sequence
MATTTETDST PVDESRTISQ RLPDNLAMHV GIILSIVAMA APLLLAIIMS TQTTSEVYEV 
TNLGLGSQGL SNYQTVLSEY QFTTYLLNSF VMSIIIVVGK VGISLLAALA LVYYELPYER
AVFMFILLTL LLPVPVRIVP LFQLMADLGW TNTMLALTGP YIASATAVFL FRQHFMSIPS
SLVETARMSG IGPATFLFKV LIPMSKGMIA GVCVITYIYS WNQFLWPLVA VNDKSSQVVQ
VGISYLQGSA QAGLTPWGLI MAGACIALLP PLLVLIVLHR PLLQTFAVQR K