Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0329 |
Symbol | |
ID | 8409827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 323099 |
End bp | 324238 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645018654 |
Product | ABC transporter related |
Protein accession | YP_003176173 |
Protein GI | 257386400 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.939732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGA TACAACTCAC AGATCTCGAG AAGCAGTACG ACGACGTACT CGCAGTCAAG GGTATCGATC TGGAAGCACA GGACGGGGAG TTCCTCGTGC TGGTCGGTCC GTCGGGGTGT GGCAAGTCGA CGACCCTGCG GATGATCGCG GGGCTCGAAG ACATCACGTC CGGGACCCTG CGGATCGACG ACGAGGTCGT CAACGACGTG CCGCCGAAAG ACCGGGACAT CGCGATGATG TTCCAGAACT ATGCGCTGTA CCCCCACATG ACCGCCGCCG AGAACATGAA GTTCGGCATG AAGTCGGTCA GCGACTTCTC CAGCGATGAG ATCGACCAGC GCGTCGAGGA GGCCGCCGAG ACACTCGACA TCGCCGACCT CCTCGACCGC AAGCCAAAGG AGCTCTCCGG TGGGGAGCGC CAGCGCGTGG CCATCGGCCG GGCGATCGTC CGCGAGCCGG AGGTGTTCCT GCTCGACGAG CCGCTCTCGA ACCTGGACGC CAAGCTCCGG GTCCAGATGC GCGCCGAGCT GCTCAGGCTC CACGAGGAGC TCGACTCCTC GACGGTCTAC GTGACCCACG ACCAGACCGA GGCGATGACG CTGGGCGATC GCGTCGCCGT CCTCGACGCG GGCGAACTAC AGCAGGTCGC GCCACCGCAG GAGCTGTACG ACTTCCCGGC CAACCGGTTC GTCGCGGAGT TCATCGGCGA GCCGGCGATG AACGTGTTCC CCGTGGACGT CCACGAGCGC AACGGACACT ACGTCGCCGA CCACGCCGGC TTCAGCATCT CGCTCCCCGA CGGCGAGGGG CTCGACACCG CGAGCGACTC CTCGGTGTCG ATGGGCGTTC GACCGGAGGA CATCTCGCTG GCCTCGAACC TGCCCGACGA CGCCGAGACG TTCGCGGTCG AGACCACGGT CAGGGAACCG CTCGGCGAGC TGCTGTTACT GCACTGCCAG CTCGGCGACG ACGAGATCCA CGTCAAAGTC GAGCCACGCA GCGAGATCCA GCCGGGCGAG ACCATCGAGG TCGGGTTCGA CGAGGACCGT CTCCACCTCT TCGACGCTCG ATCGGGCGAC GCGCTGTATC ACTCGACGGC TCCGGAAGCG ACGAAGTCCG AACCGGTGGT CACGGAGTAA
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Protein sequence | MARIQLTDLE KQYDDVLAVK GIDLEAQDGE FLVLVGPSGC GKSTTLRMIA GLEDITSGTL RIDDEVVNDV PPKDRDIAMM FQNYALYPHM TAAENMKFGM KSVSDFSSDE IDQRVEEAAE TLDIADLLDR KPKELSGGER QRVAIGRAIV REPEVFLLDE PLSNLDAKLR VQMRAELLRL HEELDSSTVY VTHDQTEAMT LGDRVAVLDA GELQQVAPPQ ELYDFPANRF VAEFIGEPAM NVFPVDVHER NGHYVADHAG FSISLPDGEG LDTASDSSVS MGVRPEDISL ASNLPDDAET FAVETTVREP LGELLLLHCQ LGDDEIHVKV EPRSEIQPGE TIEVGFDEDR LHLFDARSGD ALYHSTAPEA TKSEPVVTE
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