Gene Hmuk_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0329 
Symbol 
ID8409827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp323099 
End bp324238 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content66% 
IMG OID645018654 
ProductABC transporter related 
Protein accessionYP_003176173 
Protein GI257386400 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.939732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGA TACAACTCAC AGATCTCGAG AAGCAGTACG ACGACGTACT CGCAGTCAAG 
GGTATCGATC TGGAAGCACA GGACGGGGAG TTCCTCGTGC TGGTCGGTCC GTCGGGGTGT
GGCAAGTCGA CGACCCTGCG GATGATCGCG GGGCTCGAAG ACATCACGTC CGGGACCCTG
CGGATCGACG ACGAGGTCGT CAACGACGTG CCGCCGAAAG ACCGGGACAT CGCGATGATG
TTCCAGAACT ATGCGCTGTA CCCCCACATG ACCGCCGCCG AGAACATGAA GTTCGGCATG
AAGTCGGTCA GCGACTTCTC CAGCGATGAG ATCGACCAGC GCGTCGAGGA GGCCGCCGAG
ACACTCGACA TCGCCGACCT CCTCGACCGC AAGCCAAAGG AGCTCTCCGG TGGGGAGCGC
CAGCGCGTGG CCATCGGCCG GGCGATCGTC CGCGAGCCGG AGGTGTTCCT GCTCGACGAG
CCGCTCTCGA ACCTGGACGC CAAGCTCCGG GTCCAGATGC GCGCCGAGCT GCTCAGGCTC
CACGAGGAGC TCGACTCCTC GACGGTCTAC GTGACCCACG ACCAGACCGA GGCGATGACG
CTGGGCGATC GCGTCGCCGT CCTCGACGCG GGCGAACTAC AGCAGGTCGC GCCACCGCAG
GAGCTGTACG ACTTCCCGGC CAACCGGTTC GTCGCGGAGT TCATCGGCGA GCCGGCGATG
AACGTGTTCC CCGTGGACGT CCACGAGCGC AACGGACACT ACGTCGCCGA CCACGCCGGC
TTCAGCATCT CGCTCCCCGA CGGCGAGGGG CTCGACACCG CGAGCGACTC CTCGGTGTCG
ATGGGCGTTC GACCGGAGGA CATCTCGCTG GCCTCGAACC TGCCCGACGA CGCCGAGACG
TTCGCGGTCG AGACCACGGT CAGGGAACCG CTCGGCGAGC TGCTGTTACT GCACTGCCAG
CTCGGCGACG ACGAGATCCA CGTCAAAGTC GAGCCACGCA GCGAGATCCA GCCGGGCGAG
ACCATCGAGG TCGGGTTCGA CGAGGACCGT CTCCACCTCT TCGACGCTCG ATCGGGCGAC
GCGCTGTATC ACTCGACGGC TCCGGAAGCG ACGAAGTCCG AACCGGTGGT CACGGAGTAA
 
Protein sequence
MARIQLTDLE KQYDDVLAVK GIDLEAQDGE FLVLVGPSGC GKSTTLRMIA GLEDITSGTL 
RIDDEVVNDV PPKDRDIAMM FQNYALYPHM TAAENMKFGM KSVSDFSSDE IDQRVEEAAE
TLDIADLLDR KPKELSGGER QRVAIGRAIV REPEVFLLDE PLSNLDAKLR VQMRAELLRL
HEELDSSTVY VTHDQTEAMT LGDRVAVLDA GELQQVAPPQ ELYDFPANRF VAEFIGEPAM
NVFPVDVHER NGHYVADHAG FSISLPDGEG LDTASDSSVS MGVRPEDISL ASNLPDDAET
FAVETTVREP LGELLLLHCQ LGDDEIHVKV EPRSEIQPGE TIEVGFDEDR LHLFDARSGD
ALYHSTAPEA TKSEPVVTE