Gene Hmuk_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0323 
Symbol 
ID8409821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp315442 
End bp316233 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID645018648 
ProductHpcH/HpaI aldolase 
Protein accessionYP_003176167 
Protein GI257386394 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.187244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG TCAAAGACGC AATCGAGGCC GGAGAGTCGC CGCTCGGGAC GTGGATCTCC 
GTCGGCCATC CCACGATCAC AGAGGCGATA GCACAGCTCG ACATCGACTT CCTCCTCGTC
GACATGGAGC ACACGACGAT GAGCTTAGAG ACCGTCGAGA GCATCGCACG GAGTGTCGAC
GCCGCCGACG GCGAGACGGA GACGGTCGTC CGGGTCCCGT GGAACGATCC CGTCCGACTG
AAGCGCGTCG TCGATATCGG CGTCGCCGGG GTCATGGTCC CGATGGTCGG GACGGCCGAG
GAAGCCCGCG AGCTCGTCCG CGCAGTACGA TACCCGCCCG ACGGGATCAG GGGGATCGCG
GGCAGCCGAG CGACAGAGTA CGGCCGGAAC TTCGAGGAGT ACGTCGCGAA CGCCAACGGG
ACGCTCCTCA CGATCGCACA GATCGAGACC GAGGAGGGAC TGGAAAACGC CGCCGAGATC
GCCGCCGTCG ACGGCGTCGA CGCCCTGTTC GTCGGCCCCG CAGACCTCTC GGGGGCGCTG
GGGAAGTTCG CGGAGTGGGA CTCCCAGTCG CTCACGACGG CCATGGCGTC GGTCATCGAG
GCCGGGAACG ACGCGGACGT TCCGGTCGGG ACGCTGGTCA CCGACCTCGA CGACATCGAC
ACACGGGTAG AGCAGGGCCA CGACTTCCTC ATCGCCGGGA AAGACGTCGC ACTGCTGATG
GACGGCGTCG ACGAAGCCAT CGACCGATAC GACGACGCCT TCGCGGAGAC GACGCCGGCC
GAACAGGACT AA
 
Protein sequence
MTHVKDAIEA GESPLGTWIS VGHPTITEAI AQLDIDFLLV DMEHTTMSLE TVESIARSVD 
AADGETETVV RVPWNDPVRL KRVVDIGVAG VMVPMVGTAE EARELVRAVR YPPDGIRGIA
GSRATEYGRN FEEYVANANG TLLTIAQIET EEGLENAAEI AAVDGVDALF VGPADLSGAL
GKFAEWDSQS LTTAMASVIE AGNDADVPVG TLVTDLDDID TRVEQGHDFL IAGKDVALLM
DGVDEAIDRY DDAFAETTPA EQD