Gene Hmuk_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0321 
Symbol 
ID8409819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp312910 
End bp314145 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content68% 
IMG OID645018646 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003176165 
Protein GI257386392 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAG ACTTCGCATC GACGCTCGCA GCGACGATGT GGGCCGATTT CGACGAACAG 
CCACGCCGGG CGGACGGTCC GCCGGGCGAG ATCACCGACG TACAGACGGT GGTCGTCGAC
GGCAACTTCC CGTGGACGAT CGTCACCGTC GAGACCAGCG AGGGGGTCAC CGGGATCGGA
GAGTGCTACC CGTCGCCGGG CGTCCACGAG GTCATCACCG ACTACCTCCG ACCGGTGCTG
GTCGGCGAGA ACCCGACCGA CGTCGAGCGG CTGTACAACC TCATGCGCGA GAGCCTCTCC
GGGCGCGGCT CACAGCAGGG GATCGGGACG ATCGCGATCA GCGGCGTCGA GATCGCGCTG
TGGGACGCCA CGGGGAAACT CCTCGACCAG CCGATCTATC AGCTTCTGGG CGGCAAGCTG
CGCGAATCGG TCGCCGTCTA CGCGGACTGT CACGCTGGCG AGGCGATGGT CGAGTCCGCC
AGGGAGGGAC AGGAGGCCTC GACGTACGAT CCCCAGGCCT ACGCACGGGC GGCCCGCGGG
GCCGTCGACG ACGGATTCGA CATCGTGAAG TTCGACCTCG ACGTGCCCTC CGGCCGGGAG
ATCGACACGC TCTCGCGGCA CTTCGACCCG CCGGAGATCG AACACAAGCG CCGCGTCGTC
GAGGCCGTCA CCGACGAGAT CGGACACGAC GCCGAGGTCG CGGTCGACCT CCACTGGAAC
TTCAGTCCCG AGACGGCAGA GCGACTCTGT CGCGCGATCG AACCGTACGA TCTGGCCTGG
ATCGAGGACC CGCTCCCGCC GGAGAACACG GACGCGATGC GGGAACTGAA ACGCCGGGTC
GACGTGACGC TGTTGACCGG CGAGAACCGC TACGGCCGTC ACGGCTTCCG CGACCTGGTC
GCAGAGCAGG CCGTCGACTT CCTCGCTCCG GACGTTCCGA AGACCGGGGG CATCGCCGAG
ACCAAGAAGA TCGCCGAGCT GGCCGAGACC TACTACCAGG CGCTCGTCCC CCACAACATC
GGTAGTCCCG TCGCGACCGC GGCGACGGTC CACGTCGGTG CGACGGTCCC CAACTTCGTG
GCCCTGGAGT ACCACGCCCG CGAAGTCTCG TGGTGGGACG ACCTGCTCGT CCGCGACGAG
CCGTTCATCC GCGACGGCCG CATTCGGGTG CCCGACGGAC CGGGCCTCGG CGTCGAACTC
GACTGGGACG CCGTCGAGGA CCACCGAAAG CACTGA
 
Protein sequence
MYEDFASTLA ATMWADFDEQ PRRADGPPGE ITDVQTVVVD GNFPWTIVTV ETSEGVTGIG 
ECYPSPGVHE VITDYLRPVL VGENPTDVER LYNLMRESLS GRGSQQGIGT IAISGVEIAL
WDATGKLLDQ PIYQLLGGKL RESVAVYADC HAGEAMVESA REGQEASTYD PQAYARAARG
AVDDGFDIVK FDLDVPSGRE IDTLSRHFDP PEIEHKRRVV EAVTDEIGHD AEVAVDLHWN
FSPETAERLC RAIEPYDLAW IEDPLPPENT DAMRELKRRV DVTLLTGENR YGRHGFRDLV
AEQAVDFLAP DVPKTGGIAE TKKIAELAET YYQALVPHNI GSPVATAATV HVGATVPNFV
ALEYHAREVS WWDDLLVRDE PFIRDGRIRV PDGPGLGVEL DWDAVEDHRK H