Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0278 |
Symbol | |
ID | 8409776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 272724 |
End bp | 273614 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645018603 |
Product | periplasmic binding protein |
Protein accession | YP_003176122 |
Protein GI | 257386349 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.10405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0273457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTCG TCACGCTGCT GCCGTCGGCG ACCGAGATCG TCTACGCGCT CGGCGTCGAG CCGGTCGGCG TCTCCCACGA GTGCGACTAT CCCCCGGCGG CCAGCGAGCA GCCGTCGGTG AACCGCTCGC GGGTCGATCC GACGGCCGCG AGCGGCGAGA TCAACGAGCA GGTCGCCGCC GCCGAGGAGG AAGGCGTCTA CGCCATCGAA CGAGAGACCC TGGCGTCGCT CGATCCCGAC CTGATCGTCA CGCAGGGCGT CTGTGACGTG TGCGCCGTCG ACCACGTCGT CGTCGAAGAC GCGGTCGCGG AACTCGGTCT CGACGCGGAG GTGCTGACGC TCGACGTACA CTCCCTCGAC GACCTCTTCG AGTCGATCCA GCGCATCGGA GACGTACTCG GCCGTGGCGA GCGGGCGAGC GAGCTGGTCG GCGACTTGCG CTCGCGGGTG GCCGAGGTCG AGACGACGGC CGGGCGAGCC GAGTCGACGC CGAGCGTCGC CGTCCTCGAC TGGACGGAGC CGGTCATGGT CGCCGGCCAC TGGGTGCCCG AGATGGTCGC CAGCGCCGGT GGCGAGTACG GGCTGGAGTC GGCAGGCGCA CACTCCCGAC CGCGCGAGTG GGACGAGATC AGGGCGTACG ATCCGGAGCG ACTGATCGTC TCGCCCTGCG GGTTCGACCT GGCACAGATC CGCGAAAATC TCACGGACCT GACCGAGCGG CCGGGGTGGG CAGAGCTGTC GGCAGTCCGG AACGGGCACG TCACGCTCGT CGACGGCCAC CACTACGTCA ACCGGTCGGG ACCGCGCCTC GTCGACACGC TGGAGTTCCT CGGCTGGGCG ATCCACCCAG ATCCGTTCGA TCGACCGCCG AGAGACGCCG TCAGTCGCTG A
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Protein sequence | MRVVTLLPSA TEIVYALGVE PVGVSHECDY PPAASEQPSV NRSRVDPTAA SGEINEQVAA AEEEGVYAIE RETLASLDPD LIVTQGVCDV CAVDHVVVED AVAELGLDAE VLTLDVHSLD DLFESIQRIG DVLGRGERAS ELVGDLRSRV AEVETTAGRA ESTPSVAVLD WTEPVMVAGH WVPEMVASAG GEYGLESAGA HSRPREWDEI RAYDPERLIV SPCGFDLAQI RENLTDLTER PGWAELSAVR NGHVTLVDGH HYVNRSGPRL VDTLEFLGWA IHPDPFDRPP RDAVSR
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